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The map label for this gene is 15603129

Identifier: 15603129

GI number: 15603129

Start: 1457188

End: 1457841

Strand: Reverse

Name: 15603129

Synonym: PM1264

Alternate gene names: NA

Gene position: 1457841-1457188 (Counterclockwise)

Preceding gene: 15603130

Following gene: 15603128

Centisome position: 64.58

GC content: 43.12

Gene sequence:

>654_bases
ATGTCCACAACACAACAACTTATCAACAATTCAGGGCGCTATTGGCTGGATTATATCCACCACCCTTTTGTGCAACAGTT
AGCCGACGGTACCTTGCCGAAAGCGTGTTTTCAGCACTATTTAAAACAAGATTATTTATTTTTATTTCAATATAACCGTG
CCTTGTCCTTAGGGATTTACAAAGCAGACAATTTTGCACAAATGAAAGCCGCACAAGACGCCATTGGCGCTCTGTTACAT
GAAATTCAGCTACACATTCAATACTGTGAAAGCTGGGGTATTGATGAAAATACCTTATTTCGCACGGAAGAATCTGCCGC
TTGTGTGGCTTACACCCGTTATGTCTTAGATGCGGGTATGACGGGCGGTTTAGCTGAACTTTATACCGCGCTAGCCCCTT
GTGCGATTGGTTATGCCGTGATTGCAAAGCATATTGTAGAAAGTGGCAAAAGCCCAGCAAACAACCCTTACCAAGCATGG
ATTGATACCTATTCTGGCGAAGAATTCCAAAATGCAGCACAAAACGCAATCGCTACCTTAGATGCACTTTGTGCGGATCG
CTCTGAAGCACAGCTTGCTAAATTACAACAGATTTTTAATACCGCCACACGCATGGAATCGGCGTTTTGGCAAATGGGAT
TGGATTTAAGTTAA

Upstream 100 bases:

>100_bases
GCTACCTTGGGTGCAATACATTAAATAAAACATAGATCATGGCGATGCCAGATAAAGTGCGGTCAATTTGAAAAACGTTT
TAGCAAGAAAAGGAAAAAAC

Downstream 100 bases:

>100_bases
AAAATAAAAAAGGAGACAAAAAATGCAAAAACTCGTGAAAAAGACCCTTACTGTCGCATTTGCCATGGGAGTAAGCCTGT
CGGTATCCGCCAAAGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSTTQQLINNSGRYWLDYIHHPFVQQLADGTLPKACFQHYLKQDYLFLFQYNRALSLGIYKADNFAQMKAAQDAIGALLH
EIQLHIQYCESWGIDENTLFRTEESAACVAYTRYVLDAGMTGGLAELYTALAPCAIGYAVIAKHIVESGKSPANNPYQAW
IDTYSGEEFQNAAQNAIATLDALCADRSEAQLAKLQQIFNTATRMESAFWQMGLDLS

Sequences:

>Translated_217_residues
MSTTQQLINNSGRYWLDYIHHPFVQQLADGTLPKACFQHYLKQDYLFLFQYNRALSLGIYKADNFAQMKAAQDAIGALLH
EIQLHIQYCESWGIDENTLFRTEESAACVAYTRYVLDAGMTGGLAELYTALAPCAIGYAVIAKHIVESGKSPANNPYQAW
IDTYSGEEFQNAAQNAIATLDALCADRSEAQLAKLQQIFNTATRMESAFWQMGLDLS
>Mature_216_residues
STTQQLINNSGRYWLDYIHHPFVQQLADGTLPKACFQHYLKQDYLFLFQYNRALSLGIYKADNFAQMKAAQDAIGALLHE
IQLHIQYCESWGIDENTLFRTEESAACVAYTRYVLDAGMTGGLAELYTALAPCAIGYAVIAKHIVESGKSPANNPYQAWI
DTYSGEEFQNAAQNAIATLDALCADRSEAQLAKLQQIFNTATRMESAFWQMGLDLS

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=204, Percent_Identity=27.9411764705882, Blast_Score=97, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325378, Length=204, Percent_Identity=25.9803921568627, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324997, Length=208, Percent_Identity=27.8846153846154, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 24286; Mature: 24154

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTQQLINNSGRYWLDYIHHPFVQQLADGTLPKACFQHYLKQDYLFLFQYNRALSLGIY
CCCHHHHHHCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEE
KADNFAQMKAAQDAIGALLHEIQLHIQYCESWGIDENTLFRTEESAACVAYTRYVLDAGM
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCC
TGGLAELYTALAPCAIGYAVIAKHIVESGKSPANNPYQAWIDTYSGEEFQNAAQNAIATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
DALCADRSEAQLAKLQQIFNTATRMESAFWQMGLDLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STTQQLINNSGRYWLDYIHHPFVQQLADGTLPKACFQHYLKQDYLFLFQYNRALSLGIY
CCHHHHHHCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEE
KADNFAQMKAAQDAIGALLHEIQLHIQYCESWGIDENTLFRTEESAACVAYTRYVLDAGM
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCC
TGGLAELYTALAPCAIGYAVIAKHIVESGKSPANNPYQAWIDTYSGEEFQNAAQNAIATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
DALCADRSEAQLAKLQQIFNTATRMESAFWQMGLDLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]