Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 15603123

GI number: 15603123

Start: 1451428

End: 1452006

Strand: Reverse

Name: yqhA [C]

Synonym: PM1258

Alternate gene names: 15603123

Gene position: 1452006-1451428 (Counterclockwise)

Preceding gene: 15603124

Following gene: 15603121

Centisome position: 64.32

GC content: 38.51

Gene sequence:

>579_bases
ATGGAACAACCTATTCAACCTTCACAACACAATACAAAACAAAAACGCCATAAGTCACGCCAACGCCAAGCTGCGCCAAA
TGTCATCAGCCAAATTATCTTTGCCAGTCGTTGGTTACAATTACCTATTTATTTAGGATTAATTGTCGTACAAGGTCTTT
ATGCCTATAAATTCATGAAATCTTTATGGGAATTAATGACTAATTTACAAAGTATGGACGCGAATATGATCATGTTAGCC
GTACTGAACTTAATCGATGTAGTGATGATTGCTAACTTGCTAGTGATGGTGATCGTCGGGGGCTATGAAATTTTCGTTTC
CAAGTTACGTACTAAAGATCACCCTGATGAACCAGAATGGCTTAGTCATGTAAATGCCTCAGTCCTCAAAGTGAAACTGT
CGATGTCGATTATTAGTATTTCGTCAATCCATTTACTCCAAACTTTCGTCAATGCCGCCAATATGGACGAAAAAACCATG
ATGTGGCAATTATTCCTGCACCTCGGTTTCTTGGTTTCTGCGGTTGCTATGGCATATACCGATAAAATTTTGTATAGCAC
AAGCCATAAAGGACATTAA

Upstream 100 bases:

>100_bases
CATTTCATTTTGTGGCTAACACAAAAATTCGTTGAACTTTGGCTAAAAAACAGGTACTTTGCACACTTCTTTTGATTTAG
CTGAAAAACGATAAATAAAT

Downstream 100 bases:

>100_bases
GGCATTACACTACCTGACTAAAAAGCAAAAACCTGTCAATACACACTGTGTTGACAGGTTTTTTACTTTTACTTTTATGC
GATTAACTCGGCATAACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEQPIQPSQHNTKQKRHKSRQRQAAPNVISQIIFASRWLQLPIYLGLIVVQGLYAYKFMKSLWELMTNLQSMDANMIMLA
VLNLIDVVMIANLLVMVIVGGYEIFVSKLRTKDHPDEPEWLSHVNASVLKVKLSMSIISISSIHLLQTFVNAANMDEKTM
MWQLFLHLGFLVSAVAMAYTDKILYSTSHKGH

Sequences:

>Translated_192_residues
MEQPIQPSQHNTKQKRHKSRQRQAAPNVISQIIFASRWLQLPIYLGLIVVQGLYAYKFMKSLWELMTNLQSMDANMIMLA
VLNLIDVVMIANLLVMVIVGGYEIFVSKLRTKDHPDEPEWLSHVNASVLKVKLSMSIISISSIHLLQTFVNAANMDEKTM
MWQLFLHLGFLVSAVAMAYTDKILYSTSHKGH
>Mature_192_residues
MEQPIQPSQHNTKQKRHKSRQRQAAPNVISQIIFASRWLQLPIYLGLIVVQGLYAYKFMKSLWELMTNLQSMDANMIMLA
VLNLIDVVMIANLLVMVIVGGYEIFVSKLRTKDHPDEPEWLSHVNASVLKVKLSMSIISISSIHLLQTFVNAANMDEKTM
MWQLFLHLGFLVSAVAMAYTDKILYSTSHKGH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=151, Percent_Identity=39.0728476821192, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1258_PASMU (P57929)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246195.1
- GeneID:   1244605
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1258
- NMPDR:   fig|272843.1.peg.1258
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- BioCyc:   PMUL272843:PM1258-MONOMER
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 21926; Mature: 21926

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe4ee004)-; HASH(0xe7e625c)-; HASH(0xe5fbda4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQPIQPSQHNTKQKRHKSRQRQAAPNVISQIIFASRWLQLPIYLGLIVVQGLYAYKFMK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLWELMTNLQSMDANMIMLAVLNLIDVVMIANLLVMVIVGGYEIFVSKLRTKDHPDEPEW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LSHVNASVLKVKLSMSIISISSIHLLQTFVNAANMDEKTMMWQLFLHLGFLVSAVAMAYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DKILYSTSHKGH
HHHHHCCCCCCH
>Mature Secondary Structure
MEQPIQPSQHNTKQKRHKSRQRQAAPNVISQIIFASRWLQLPIYLGLIVVQGLYAYKFMK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLWELMTNLQSMDANMIMLAVLNLIDVVMIANLLVMVIVGGYEIFVSKLRTKDHPDEPEW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LSHVNASVLKVKLSMSIISISSIHLLQTFVNAANMDEKTMMWQLFLHLGFLVSAVAMAYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DKILYSTSHKGH
HHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100