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The map label for this gene is yfjD [C]

Identifier: 15603050

GI number: 15603050

Start: 1380872

End: 1382131

Strand: Direct

Name: yfjD [C]

Synonym: PM1185

Alternate gene names: 15603050

Gene position: 1380872-1382131 (Clockwise)

Preceding gene: 15603049

Following gene: 15603051

Centisome position: 61.17

GC content: 38.25

Gene sequence:

>1260_bases
TTGGACAGTATTCCCCTTAGTACCCTCTTTATTACACTCATCATCTTATTGATCATCTCTGCTTATTTTTCAGGCTCTGA
AACCGGTTTGTTGTCTGCCAATCGTTATCGACTACGCCATTTAGCCGAAAAAGGGCATAGAGGTGCGAAAAAAGCGGAAA
AATTACTGAAAAAAACAGATGTTTTGCTTAGCCTGATTTTAATTTGTAATAACTTAGTCAATATTACTGCTTCTGCCATT
ACCACGATTATCGGCATGCGCTTATATGGCGATGCGGGAGTCGCCATTGCAACTGGGGCATTAACCTTTGTGATGCTTAT
TTTTGCTGAAATTTTGCCGAAAACTATCGCCGCCCGTTATCCAGAAAAAGTGGCATTCACGTCCAGTCATTTGTTGTCCG
TTTTTCTGCGACTTTTTACCCCGTTGGTCTATTTAATGAATTTAATTATTCAGGGGATTTTGGCACTATTACGTCTAAAA
TCAGATAATAAATCAACTTCATTAAGCCCAGAAGAATTACGTTCCATCGTAAATGAATCAGGTAAATTTATTCCTTCCGC
CCACCAAGAAATGCTGTTATCTATTTTGGATTTAGAAGGGGTCACCGTAGATGACATTATGGTGCCACGTAATGACATTG
GGGGTATTGATATTGACGATGATTGGAAAGCCATTATGCGTCAACTTAACCATGCAGCGCACGGGCGTGTTGTACTGTAT
AAAGGAAATATGGATGAAAATATTTTGGGGATGTTACGTGTACGTGAAGCCTATCGCTTAATGCTCGATAAAAATGAATT
TAACAAAGAAACTTTAATCCGTGCCGCCGATGAAGTGTATTTTATTCCTGAAGGTACGCCACTGAATAGCCAATTATTAA
ATTTCCGCAACAATAAAGAAAGGATTGGTTTAGTTGTAGATGAATATGGTGATATTAAAGGCTTAGTCACCTTAGAAGAT
ATCTTAGAAGAGATTGTCGGTGAATTTACCACTTCAACAGCCCCATCAATTAACGATGAAGTTATCCCACAATCAGACGG
TTCTCTTATCATTGAGGGCTCCGCCAATTTACGTGATTTGAATAAATTATTTGACTGGAATCTCGATACCGAAGATGCAC
GTACCTTCAACGGCTTAATTTTAGAGCATTTAGAAGAAATTCCAGAAGAAGGAACGGTATGTGAAATTAATGGGCTACAA
ATCACGATTCTAGAAGTGAATGACAACATGATTAAACAAGCCAAAGTCATTAAACTTTAA

Upstream 100 bases:

>100_bases
CAAGATTTATTTATGCTACGCCATAGTAAAAGTGCGGTTCAAAAAACGAAAAAAATGACCGCACTTTTCGATTTTTGATT
AACTCGCAAAAGGATGCATT

Downstream 100 bases:

>100_bases
TTCAACATCTGGCTAAGCGATGTCATCAAGACATCGCTTTTTTATTCCGTACATGAATGTTTGATCCAACACAACATTTA
TTCAACATTGGATAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MDSIPLSTLFITLIILLIISAYFSGSETGLLSANRYRLRHLAEKGHRGAKKAEKLLKKTDVLLSLILICNNLVNITASAI
TTIIGMRLYGDAGVAIATGALTFVMLIFAEILPKTIAARYPEKVAFTSSHLLSVFLRLFTPLVYLMNLIIQGILALLRLK
SDNKSTSLSPEELRSIVNESGKFIPSAHQEMLLSILDLEGVTVDDIMVPRNDIGGIDIDDDWKAIMRQLNHAAHGRVVLY
KGNMDENILGMLRVREAYRLMLDKNEFNKETLIRAADEVYFIPEGTPLNSQLLNFRNNKERIGLVVDEYGDIKGLVTLED
ILEEIVGEFTTSTAPSINDEVIPQSDGSLIIEGSANLRDLNKLFDWNLDTEDARTFNGLILEHLEEIPEEGTVCEINGLQ
ITILEVNDNMIKQAKVIKL

Sequences:

>Translated_419_residues
MDSIPLSTLFITLIILLIISAYFSGSETGLLSANRYRLRHLAEKGHRGAKKAEKLLKKTDVLLSLILICNNLVNITASAI
TTIIGMRLYGDAGVAIATGALTFVMLIFAEILPKTIAARYPEKVAFTSSHLLSVFLRLFTPLVYLMNLIIQGILALLRLK
SDNKSTSLSPEELRSIVNESGKFIPSAHQEMLLSILDLEGVTVDDIMVPRNDIGGIDIDDDWKAIMRQLNHAAHGRVVLY
KGNMDENILGMLRVREAYRLMLDKNEFNKETLIRAADEVYFIPEGTPLNSQLLNFRNNKERIGLVVDEYGDIKGLVTLED
ILEEIVGEFTTSTAPSINDEVIPQSDGSLIIEGSANLRDLNKLFDWNLDTEDARTFNGLILEHLEEIPEEGTVCEINGLQ
ITILEVNDNMIKQAKVIKL
>Mature_419_residues
MDSIPLSTLFITLIILLIISAYFSGSETGLLSANRYRLRHLAEKGHRGAKKAEKLLKKTDVLLSLILICNNLVNITASAI
TTIIGMRLYGDAGVAIATGALTFVMLIFAEILPKTIAARYPEKVAFTSSHLLSVFLRLFTPLVYLMNLIIQGILALLRLK
SDNKSTSLSPEELRSIVNESGKFIPSAHQEMLLSILDLEGVTVDDIMVPRNDIGGIDIDDDWKAIMRQLNHAAHGRVVLY
KGNMDENILGMLRVREAYRLMLDKNEFNKETLIRAADEVYFIPEGTPLNSQLLNFRNNKERIGLVVDEYGDIKGLVTLED
ILEEIVGEFTTSTAPSINDEVIPQSDGSLIIEGSANLRDLNKLFDWNLDTEDARTFNGLILEHLEEIPEEGTVCEINGLQ
ITILEVNDNMIKQAKVIKL

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=404, Percent_Identity=25.7425742574257, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI94681046, Length=325, Percent_Identity=26.7692307692308, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI40068055, Length=338, Percent_Identity=26.0355029585799, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI40068053, Length=338, Percent_Identity=26.0355029585799, Blast_Score=76, Evalue=5e-14,
Organism=Escherichia coli, GI145693175, Length=397, Percent_Identity=63.727959697733, Blast_Score=521, Evalue=1e-149,
Organism=Escherichia coli, GI87082033, Length=270, Percent_Identity=29.2592592592593, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790664, Length=434, Percent_Identity=20.2764976958525, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1786879, Length=249, Percent_Identity=26.1044176706827, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788119, Length=230, Percent_Identity=29.5652173913043, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6324512, Length=350, Percent_Identity=23.7142857142857, Blast_Score=77, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46663; Mature: 46663

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIPLSTLFITLIILLIISAYFSGSETGLLSANRYRLRHLAEKGHRGAKKAEKLLKKTD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH
VLLSLILICNNLVNITASAITTIIGMRLYGDAGVAIATGALTFVMLIFAEILPKTIAARY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEKVAFTSSHLLSVFLRLFTPLVYLMNLIIQGILALLRLKSDNKSTSLSPEELRSIVNES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
GKFIPSAHQEMLLSILDLEGVTVDDIMVPRNDIGGIDIDDDWKAIMRQLNHAAHGRVVLY
CCCCCHHHHHHHHHHHHCCCCEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
KGNMDENILGMLRVREAYRLMLDKNEFNKETLIRAADEVYFIPEGTPLNSQLLNFRNNKE
ECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCC
RIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSTAPSINDEVIPQSDGSLIIEGSANLRDL
CEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
NKLFDWNLDTEDARTFNGLILEHLEEIPEEGTVCEINGLQITILEVNDNMIKQAKVIKL
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure
MDSIPLSTLFITLIILLIISAYFSGSETGLLSANRYRLRHLAEKGHRGAKKAEKLLKKTD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH
VLLSLILICNNLVNITASAITTIIGMRLYGDAGVAIATGALTFVMLIFAEILPKTIAARY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEKVAFTSSHLLSVFLRLFTPLVYLMNLIIQGILALLRLKSDNKSTSLSPEELRSIVNES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
GKFIPSAHQEMLLSILDLEGVTVDDIMVPRNDIGGIDIDDDWKAIMRQLNHAAHGRVVLY
CCCCCHHHHHHHHHHHHCCCCEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
KGNMDENILGMLRVREAYRLMLDKNEFNKETLIRAADEVYFIPEGTPLNSQLLNFRNNKE
ECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCC
RIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSTAPSINDEVIPQSDGSLIIEGSANLRDL
CEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
NKLFDWNLDTEDARTFNGLILEHLEEIPEEGTVCEINGLQITILEVNDNMIKQAKVIKL
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]