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The map label for this gene is nifC [C]

Identifier: 15602974

GI number: 15602974

Start: 1304496

End: 1305299

Strand: Direct

Name: nifC [C]

Synonym: PM1109

Alternate gene names: 15602974

Gene position: 1304496-1305299 (Clockwise)

Preceding gene: 15602973

Following gene: 15602975

Centisome position: 57.79

GC content: 42.16

Gene sequence:

>804_bases
TTGTCGATGAAGGTTTCTTACCTATTAAATAAAAGTCTGAGTTTAAAGCTTGCACTGCTCCCTTTGCTACTTTTATTGCT
CGTCGTCATTGGGTCTGTGCTTGCTCTGATAAGCCAGCTCAACTTTTCCTTTTTTCTGCTGGTTCTCACTGATCCTGAGC
TGCATTTTGCGCTATGGATGTCTCTTGCGACATCCATACTGTCTTTACTGCTGGCTATTTTTATTGCAATCCCATCAGCA
TGGGTCATGAGCCAAGTGCGGTTACCTTTGCAAAAATTGATTGATACTTTTCTTGATTTGCCCATGGTATTACCACCGTT
GGTCACAGGTTTAAGCTTACTGCTTTTATTTAATTCACAGGGCATCTTGAGCCAATTCATTCCCATTATTAGCCAATGGA
TATTCAGCCCGCTTGGTATAATTGTGGCACAAACTTATATTGCCAGTTCCATTATGTTACGTAATGCTCGCGGTACTTTT
TCTAGCTTAGATTCAGGCTATCGCCTCGCTGCATACAATTTAGGTTTGTCACCGCTTCAGACCTTGCTCAAAATAGAATT
ACCAATGTGTTGGAAACCATTACTTTGTGGCGCGATTTTGGCTTGGTCCCGAGCAATTGGGGAATTTGGTGCGACGTTGA
TGTTAGCGGGTGCTACGCGTTTTAAAACAGAAACCTTGCCCATGGCGGTCTATTTAAATATTGCCAGTGGTGATTTTGAG
ATTGCGGTAGGCGCATCACTATGGCTTTTATTCATTGCTGCTTGCTTACTGTTAGTCTTACGTACACTCAATAGGAATAT
CTAG

Upstream 100 bases:

>100_bases
GAAGAAAAAGTCACTATTGCCCTGCTTGCTTCCACTAAACATCCGAAAGAAGCCAAACAGTTACTTGACCTTTTTAACTC
AGAACAAGGTGTGAAATATT

Downstream 100 bases:

>100_bases
GATGCTCAAGATTGAAAATTTATCTGCGGGTATTTTACGTCATATCCATTTACACGTTAGTAAAGGAGAATGTGTCGCTG
TAGTAGGACAATCTGGTAGT

Product: NifC

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSMKVSYLLNKSLSLKLALLPLLLLLLVVIGSVLALISQLNFSFFLLVLTDPELHFALWMSLATSILSLLLAIFIAIPSA
WVMSQVRLPLQKLIDTFLDLPMVLPPLVTGLSLLLLFNSQGILSQFIPIISQWIFSPLGIIVAQTYIASSIMLRNARGTF
SSLDSGYRLAAYNLGLSPLQTLLKIELPMCWKPLLCGAILAWSRAIGEFGATLMLAGATRFKTETLPMAVYLNIASGDFE
IAVGASLWLLFIAACLLLVLRTLNRNI

Sequences:

>Translated_267_residues
MSMKVSYLLNKSLSLKLALLPLLLLLLVVIGSVLALISQLNFSFFLLVLTDPELHFALWMSLATSILSLLLAIFIAIPSA
WVMSQVRLPLQKLIDTFLDLPMVLPPLVTGLSLLLLFNSQGILSQFIPIISQWIFSPLGIIVAQTYIASSIMLRNARGTF
SSLDSGYRLAAYNLGLSPLQTLLKIELPMCWKPLLCGAILAWSRAIGEFGATLMLAGATRFKTETLPMAVYLNIASGDFE
IAVGASLWLLFIAACLLLVLRTLNRNI
>Mature_266_residues
SMKVSYLLNKSLSLKLALLPLLLLLLVVIGSVLALISQLNFSFFLLVLTDPELHFALWMSLATSILSLLLAIFIAIPSAW
VMSQVRLPLQKLIDTFLDLPMVLPPLVTGLSLLLLFNSQGILSQFIPIISQWIFSPLGIIVAQTYIASSIMLRNARGTFS
SLDSGYRLAAYNLGLSPLQTLLKIELPMCWKPLLCGAILAWSRAIGEFGATLMLAGATRFKTETLPMAVYLNIASGDFEI
AVGASLWLLFIAACLLLVLRTLNRNI

Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0555

COG function: function code O; ABC-type sulfate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788764, Length=207, Percent_Identity=27.0531400966184, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87082099, Length=185, Percent_Identity=30.2702702702703, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786980, Length=190, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29266; Mature: 29135

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKVSYLLNKSLSLKLALLPLLLLLLVVIGSVLALISQLNFSFFLLVLTDPELHFALWM
CCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCHHHHHHHH
SLATSILSLLLAIFIAIPSAWVMSQVRLPLQKLIDTFLDLPMVLPPLVTGLSLLLLFNSQ
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
GILSQFIPIISQWIFSPLGIIVAQTYIASSIMLRNARGTFSSLDSGYRLAAYNLGLSPLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHHHH
TLLKIELPMCWKPLLCGAILAWSRAIGEFGATLMLAGATRFKTETLPMAVYLNIASGDFE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHEECCHHHHHCCCCEEEEEEEECCCEE
IAVGASLWLLFIAACLLLVLRTLNRNI
EEHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMKVSYLLNKSLSLKLALLPLLLLLLVVIGSVLALISQLNFSFFLLVLTDPELHFALWM
CEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCHHHHHHHH
SLATSILSLLLAIFIAIPSAWVMSQVRLPLQKLIDTFLDLPMVLPPLVTGLSLLLLFNSQ
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
GILSQFIPIISQWIFSPLGIIVAQTYIASSIMLRNARGTFSSLDSGYRLAAYNLGLSPLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHHHH
TLLKIELPMCWKPLLCGAILAWSRAIGEFGATLMLAGATRFKTETLPMAVYLNIASGDFE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHEECCHHHHHCCCCEEEEEEEECCCEE
IAVGASLWLLFIAACLLLVLRTLNRNI
EEHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]