| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602914
Identifier: 15602914
GI number: 15602914
Start: 1238494
End: 1239402
Strand: Reverse
Name: 15602914
Synonym: PM1049
Alternate gene names: NA
Gene position: 1239402-1238494 (Counterclockwise)
Preceding gene: 15602915
Following gene: 15602913
Centisome position: 54.9
GC content: 39.38
Gene sequence:
>909_bases ATGACTAAACTCAGTATCCAGCGAGATAACTTGATTTGTTTGAGTTATGTCGCATTAATGGGATTCGGCTTTCCCATTAT GCGTTATATGAGTATTCATTTTGATACATTAAATAATAACGCTGTTCGCTTTCTCTCAGGGGGCAGCGTTTTTATTTTAG CCTGTTTTTTTTATTATCGCGCTGAGTTAACGCGTGTTTTTCATCAGCCGAAGTTACTTTTATCATTTTTACTTCTAGCC TGTTTTATGACTGCGAATATGTATTTTTTTATCAATGGAATGAAATATACATCAGCTTTGTCTGGCAGTATTTTTGGGGT GCTGGCGATGCCCCTTTCGATTTTCATGGCGGCTATCATTTATCAAGATGAAAGAAAAAAAGTCATGCAGATCCCTTTTG CCGTGGGGAGCAGTATTTTGATTTTGGGTTCGCTGTTGTTTGTGCTTTATGGTCAACACAGCGCATCAGACAGCGATTTC TTGTTAGGTTCGCTTTTTTTAACGCTGGCTATTTTCATCCAATCTATTCAAAATTTAGTGGTGAAGCAGGTCGCGAGAGG AACCAATGTGGTCGTGTTGAGTGCATTCACGGCATTTTTGTCTGGCATGATATACTTGGTTTGGGCGTTGAAAAGTGAGA TCATTTTTCGTTTAGCTGAAGTGAGTATTGGCGCACTCGTTGAACTAAGTCTGGCGGGCGTATATGGCATGATGACAGGC ATGTTATTGGCTTTTTTTATTGTGAAAACACAAGGGATTGTGAGATTTAATGTGATTCAATTATTAGTGCCCATTTCCAC AGCATTAGTTGGCTATGTTACGTTAGGCGAAGTGATGAACGTTTACCAAGGGATAGGCGCACTATGTGTGCTTTTAGGCT GTATTTTATGTTTAAGAATCCGTACTTGA
Upstream 100 bases:
>100_bases GTGGTGATGACCGATGATGATGGCAATGCGTTATCTGGGGAGCAAGCTCAGGCGCTTTATCAAGCATTACAAAATCTCTT AGCGAAATAATACAGTCAAG
Downstream 100 bases:
>100_bases TATCGCCTTTTCTATTATGCTTTAGTGTAATTTGTTTCTTCTGCTGCTCGCTTGATTAGGCTACAATGCCAAACCAACCC TTTATTTCACTGATTAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTKLSIQRDNLICLSYVALMGFGFPIMRYMSIHFDTLNNNAVRFLSGGSVFILACFFYYRAELTRVFHQPKLLLSFLLLA CFMTANMYFFINGMKYTSALSGSIFGVLAMPLSIFMAAIIYQDERKKVMQIPFAVGSSILILGSLLFVLYGQHSASDSDF LLGSLFLTLAIFIQSIQNLVVKQVARGTNVVVLSAFTAFLSGMIYLVWALKSEIIFRLAEVSIGALVELSLAGVYGMMTG MLLAFFIVKTQGIVRFNVIQLLVPISTALVGYVTLGEVMNVYQGIGALCVLLGCILCLRIRT
Sequences:
>Translated_302_residues MTKLSIQRDNLICLSYVALMGFGFPIMRYMSIHFDTLNNNAVRFLSGGSVFILACFFYYRAELTRVFHQPKLLLSFLLLA CFMTANMYFFINGMKYTSALSGSIFGVLAMPLSIFMAAIIYQDERKKVMQIPFAVGSSILILGSLLFVLYGQHSASDSDF LLGSLFLTLAIFIQSIQNLVVKQVARGTNVVVLSAFTAFLSGMIYLVWALKSEIIFRLAEVSIGALVELSLAGVYGMMTG MLLAFFIVKTQGIVRFNVIQLLVPISTALVGYVTLGEVMNVYQGIGALCVLLGCILCLRIRT >Mature_301_residues TKLSIQRDNLICLSYVALMGFGFPIMRYMSIHFDTLNNNAVRFLSGGSVFILACFFYYRAELTRVFHQPKLLLSFLLLAC FMTANMYFFINGMKYTSALSGSIFGVLAMPLSIFMAAIIYQDERKKVMQIPFAVGSSILILGSLLFVLYGQHSASDSDFL LGSLFLTLAIFIQSIQNLVVKQVARGTNVVVLSAFTAFLSGMIYLVWALKSEIIFRLAEVSIGALVELSLAGVYGMMTGM LLAFFIVKTQGIVRFNVIQLLVPISTALVGYVTLGEVMNVYQGIGALCVLLGCILCLRIRT
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33372; Mature: 33241
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLSIQRDNLICLSYVALMGFGFPIMRYMSIHFDTLNNNAVRFLSGGSVFILACFFYYR CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHH AELTRVFHQPKLLLSFLLLACFMTANMYFFINGMKYTSALSGSIFGVLAMPLSIFMAAII HHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH YQDERKKVMQIPFAVGSSILILGSLLFVLYGQHSASDSDFLLGSLFLTLAIFIQSIQNLV HHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VKQVARGTNVVVLSAFTAFLSGMIYLVWALKSEIIFRLAEVSIGALVELSLAGVYGMMTG HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLAFFIVKTQGIVRFNVIQLLVPISTALVGYVTLGEVMNVYQGIGALCVLLGCILCLRI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RT CC >Mature Secondary Structure TKLSIQRDNLICLSYVALMGFGFPIMRYMSIHFDTLNNNAVRFLSGGSVFILACFFYYR CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHH AELTRVFHQPKLLLSFLLLACFMTANMYFFINGMKYTSALSGSIFGVLAMPLSIFMAAII HHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH YQDERKKVMQIPFAVGSSILILGSLLFVLYGQHSASDSDFLLGSLFLTLAIFIQSIQNLV HHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VKQVARGTNVVVLSAFTAFLSGMIYLVWALKSEIIFRLAEVSIGALVELSLAGVYGMMTG HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLAFFIVKTQGIVRFNVIQLLVPISTALVGYVTLGEVMNVYQGIGALCVLLGCILCLRI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]