Click here to switch to the map view.

The map label for this gene is yiaT [C]

Identifier: 15602863

GI number: 15602863

Start: 1173209

End: 1174033

Strand: Reverse

Name: yiaT [C]

Synonym: PM0998

Alternate gene names: 15602863

Gene position: 1174033-1173209 (Counterclockwise)

Preceding gene: 15602864

Following gene: 15602862

Centisome position: 52.01

GC content: 33.45

Gene sequence:

>825_bases
ATGTATTTAATATCAGAATTCATCTTCCAATTCATTTTATACGAGGTTTGTATGAAAAATAAAAGTAAATTGTTAGCATG
TTGTTTAATGGCTCTTCCAATATCCAGTTTTTCAATTGGAAATAACAATTTAATTGGTGTCGGTGTATCTGCTGGAAATA
GTATTTATCAGGTAAAAAAGAAGACAGCCGTTGAACCGTTTTTGATGCTTGATTTATCTTTTGGCAATTTTTATATGCGT
GGTGCGGCAGGGTTAAGCGAACTAGGTTATCAGCACGTTTTTACCCCGAGTTTTAGCACTTCACTGTTCTTGAGTCCCTT
TGATGGTGCACCCATAAAAAGAAAAGATCTTAAGCCTGGTTATGATTCTATTCAAGATCGTAAAACACAAGTTGCTGTAG
GGTTAGGTCTAGATTATGACTTAAGTGATTTGTTTAATTTACCAAATACGAACATTTCACTTGAAATGAAAAAAGGACGT
CGGGGGTTCAATAGCGATATTACTTTGACCCGTACTTTTATGTTAACCGATAAACTTAGTATTTCCCCTTCTTTTGGTTT
GAGTTATTATTCTGCAAAATATACTAATTACTATTTCGGTATTAAGAAAGCAGAACTGAATAAGACGAAACTTAAATCTG
TGTACCATCCGAAAAAAGCGTATTCAGGACATATTGCATTGAATAGTCATTATGCGATTACTGATCATATTGGTATGGGA
CTTTCTTTTTCCTGGGAAACTTATTCTAAAGCGATAAAAAAATCACCGATTGTGAAACGAAGTGGTGAAATAAGTTCAGC
CTTAAATTTCTACTATATGTTTTAA

Upstream 100 bases:

>100_bases
TAAGTGTTTAATTTTTATTTAATTTGATTATTTATTATCTTGTTAAATTTAAGCAAACGTTTGCTTTTATTGAGGTTTGA
CCAGTTTTTATTGAAATAAT

Downstream 100 bases:

>100_bases
TCTATCTTGAGGGAGGCAAAGTATGCCTCCCTTTTTATTCTTTTCTAGCATGATATTAAGTGAAATTGATAAAGGAGAGT
GATTTTACATGAGGAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MYLISEFIFQFILYEVCMKNKSKLLACCLMALPISSFSIGNNNLIGVGVSAGNSIYQVKKKTAVEPFLMLDLSFGNFYMR
GAAGLSELGYQHVFTPSFSTSLFLSPFDGAPIKRKDLKPGYDSIQDRKTQVAVGLGLDYDLSDLFNLPNTNISLEMKKGR
RGFNSDITLTRTFMLTDKLSISPSFGLSYYSAKYTNYYFGIKKAELNKTKLKSVYHPKKAYSGHIALNSHYAITDHIGMG
LSFSWETYSKAIKKSPIVKRSGEISSALNFYYMF

Sequences:

>Translated_274_residues
MYLISEFIFQFILYEVCMKNKSKLLACCLMALPISSFSIGNNNLIGVGVSAGNSIYQVKKKTAVEPFLMLDLSFGNFYMR
GAAGLSELGYQHVFTPSFSTSLFLSPFDGAPIKRKDLKPGYDSIQDRKTQVAVGLGLDYDLSDLFNLPNTNISLEMKKGR
RGFNSDITLTRTFMLTDKLSISPSFGLSYYSAKYTNYYFGIKKAELNKTKLKSVYHPKKAYSGHIALNSHYAITDHIGMG
LSFSWETYSKAIKKSPIVKRSGEISSALNFYYMF
>Mature_274_residues
MYLISEFIFQFILYEVCMKNKSKLLACCLMALPISSFSIGNNNLIGVGVSAGNSIYQVKKKTAVEPFLMLDLSFGNFYMR
GAAGLSELGYQHVFTPSFSTSLFLSPFDGAPIKRKDLKPGYDSIQDRKTQVAVGLGLDYDLSDLFNLPNTNISLEMKKGR
RGFNSDITLTRTFMLTDKLSISPSFGLSYYSAKYTNYYFGIKKAELNKTKLKSVYHPKKAYSGHIALNSHYAITDHIGMG
LSFSWETYSKAIKKSPIVKRSGEISSALNFYYMF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 30764; Mature: 30764

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLISEFIFQFILYEVCMKNKSKLLACCLMALPISSFSIGNNNLIGVGVSAGNSIYQVKK
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEEHH
KTAVEPFLMLDLSFGNFYMRGAAGLSELGYQHVFTPSFSTSLFLSPFDGAPIKRKDLKPG
HHCCCCEEEEEECCCCEEEECCCCHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCC
YDSIQDRKTQVAVGLGLDYDLSDLFNLPNTNISLEMKKGRRGFNSDITLTRTFMLTDKLS
HHHHHCCCEEEEEEECCCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECEE
ISPSFGLSYYSAKYTNYYFGIKKAELNKTKLKSVYHPKKAYSGHIALNSHYAITDHIGMG
CCCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHCCCCHHCCCEEEECCCEEEECCCCCC
LSFSWETYSKAIKKSPIVKRSGEISSALNFYYMF
EEECHHHHHHHHHCCCCCCCCCCHHHEEEEEEEC
>Mature Secondary Structure
MYLISEFIFQFILYEVCMKNKSKLLACCLMALPISSFSIGNNNLIGVGVSAGNSIYQVKK
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEEHH
KTAVEPFLMLDLSFGNFYMRGAAGLSELGYQHVFTPSFSTSLFLSPFDGAPIKRKDLKPG
HHCCCCEEEEEECCCCEEEECCCCHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCC
YDSIQDRKTQVAVGLGLDYDLSDLFNLPNTNISLEMKKGRRGFNSDITLTRTFMLTDKLS
HHHHHCCCEEEEEEECCCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECEE
ISPSFGLSYYSAKYTNYYFGIKKAELNKTKLKSVYHPKKAYSGHIALNSHYAITDHIGMG
CCCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHCCCCHHCCCEEEECCCEEEECCCCCC
LSFSWETYSKAIKKSPIVKRSGEISSALNFYYMF
EEECHHHHHHHHHCCCCCCCCCCHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]