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The map label for this gene is yhjA [H]

Identifier: 15602804

GI number: 15602804

Start: 1108621

End: 1110027

Strand: Direct

Name: yhjA [H]

Synonym: PM0939

Alternate gene names: 15602804

Gene position: 1108621-1110027 (Clockwise)

Preceding gene: 15602803

Following gene: 15602805

Centisome position: 49.11

GC content: 41.44

Gene sequence:

>1407_bases
ATGAGAGTTAAAAATCTATTCTTTTCCGTTGTTGCCATTGCCGTTGCCAGCTTTTTAGGCACAGTTGGTTATGTTCATAT
CTTTGATAAAGAACAATCCGCTAAACTGCTATCGCAAACGCCACTAAGTGGACAAGCACAGCAAGTGGCAAAAATCTTGT
ATGACAATGGCTGTCAATATTGCCATAGTACTAATGCAGAATTGCCTTTCTATGCTAAGTTTCCAGTAGCAGAAAGCATT
ATGCAAGAAGATATTAAAAAAGGCACACGTGTCTTTTTGTTAAATGAGATTCTTGATGGGTTAAAAGATCCTACTAAATT
GTCTGAAGTCAGCCTCGCTAAATTAGAACAAGTTCTGATTAATGATGAGATGCCTGTCGCAAAATTTGTGCATTTACACT
GGGGATCACGTCCTGATTTAGAGGAAAAAACAACGCTATTAAATTGGATACGTGAGCAACGCCAGAATCATTTTCTACCC
GCCAATACACAAGGTACAGACCCAACGCGTTTAGTCCAACCGATTCCTGATAGTGTAGCAACGGATCCACTGAAAGTCGC
ATTGGGTGACATGCTATACCACGATGGACGTCTTTCAGGTGATGGTACAATCCAGTGTCATACTTGCCATCAGTTGAAAA
ATGGTGGTGTAGATGGTCTAGATGTTTCTGTCGGTATTGATGGTCTTAAGGGAGGAATTAATGCCCCAACAGTGTATAAT
TCCGTTTTCAATATTTTACAATTCTGGGATGGACGAGCAAAAGATCTCGCTGAACAAGCAGGCGGTCCTCCTCTCAACCC
TGTTGAAATGGGCTCTAAGAATTGGGAAGACATTATCGCTAAATTCGAACAAGATGAAGCATTTAAAGCCAAGTTCTTAG
CCGTTTATCCTGCGATTAATGAAGCCACAATTACACACGCCATTGCGGAATTTGAAAAAACATTGATCACACCAAACAGC
GCATTTGACCGTTATTTGAAAGGCGAACAAAATGCACTCACAGCCGCACAAATACGTGGTTATGAGCTCTTCAAACAGCA
CAAATGCGATACTTGCCATGTTGGTGTCGCAATGGGTGGGCAATCCTTTGAGTACATGGGCTTATTTGATGATTACTTTG
CTGCCAGAGGCACACCGCTAACAGAGGCTGATCAAGGACGCTTTGCACATACCCAAGATCCTGCTGATATGCATAAATTT
AAGGTACCGACTCTACGTAATATTGCTCTGACTGCGCCATATATGCACGATGCTCGCACATCGGATCTCAAAGAGGCCGT
GCGTATTATGTTACATTATCAAAGTGGTAAAACATTACCGAACAAAGATGTAGAAGATATCAGTGCATTCTTAGAATCAC
TCACCGGTGAATATCAAGGCAAGTTACTAACCAAAGAAAATCAGTAA

Upstream 100 bases:

>100_bases
TAAATAGATTTAACGAATTAAATTTATTATCCCAGATCAAAAATCCTTATTGTTTGTAATGTTAATATGCTGATGCCTAA
CCAATAAGGAGTGATGATCT

Downstream 100 bases:

>100_bases
AGGCTTACGTTGCCCTCATCAAACCAAAGACCTGGGCGCTTGCTAGGTCTTTTTTTCTTGTCCAACAGGAACTTTATCCC
AATTTTTATTGATCTAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MRVKNLFFSVVAIAVASFLGTVGYVHIFDKEQSAKLLSQTPLSGQAQQVAKILYDNGCQYCHSTNAELPFYAKFPVAESI
MQEDIKKGTRVFLLNEILDGLKDPTKLSEVSLAKLEQVLINDEMPVAKFVHLHWGSRPDLEEKTTLLNWIREQRQNHFLP
ANTQGTDPTRLVQPIPDSVATDPLKVALGDMLYHDGRLSGDGTIQCHTCHQLKNGGVDGLDVSVGIDGLKGGINAPTVYN
SVFNILQFWDGRAKDLAEQAGGPPLNPVEMGSKNWEDIIAKFEQDEAFKAKFLAVYPAINEATITHAIAEFEKTLITPNS
AFDRYLKGEQNALTAAQIRGYELFKQHKCDTCHVGVAMGGQSFEYMGLFDDYFAARGTPLTEADQGRFAHTQDPADMHKF
KVPTLRNIALTAPYMHDARTSDLKEAVRIMLHYQSGKTLPNKDVEDISAFLESLTGEYQGKLLTKENQ

Sequences:

>Translated_468_residues
MRVKNLFFSVVAIAVASFLGTVGYVHIFDKEQSAKLLSQTPLSGQAQQVAKILYDNGCQYCHSTNAELPFYAKFPVAESI
MQEDIKKGTRVFLLNEILDGLKDPTKLSEVSLAKLEQVLINDEMPVAKFVHLHWGSRPDLEEKTTLLNWIREQRQNHFLP
ANTQGTDPTRLVQPIPDSVATDPLKVALGDMLYHDGRLSGDGTIQCHTCHQLKNGGVDGLDVSVGIDGLKGGINAPTVYN
SVFNILQFWDGRAKDLAEQAGGPPLNPVEMGSKNWEDIIAKFEQDEAFKAKFLAVYPAINEATITHAIAEFEKTLITPNS
AFDRYLKGEQNALTAAQIRGYELFKQHKCDTCHVGVAMGGQSFEYMGLFDDYFAARGTPLTEADQGRFAHTQDPADMHKF
KVPTLRNIALTAPYMHDARTSDLKEAVRIMLHYQSGKTLPNKDVEDISAFLESLTGEYQGKLLTKENQ
>Mature_468_residues
MRVKNLFFSVVAIAVASFLGTVGYVHIFDKEQSAKLLSQTPLSGQAQQVAKILYDNGCQYCHSTNAELPFYAKFPVAESI
MQEDIKKGTRVFLLNEILDGLKDPTKLSEVSLAKLEQVLINDEMPVAKFVHLHWGSRPDLEEKTTLLNWIREQRQNHFLP
ANTQGTDPTRLVQPIPDSVATDPLKVALGDMLYHDGRLSGDGTIQCHTCHQLKNGGVDGLDVSVGIDGLKGGINAPTVYN
SVFNILQFWDGRAKDLAEQAGGPPLNPVEMGSKNWEDIIAKFEQDEAFKAKFLAVYPAINEATITHAIAEFEKTLITPNS
AFDRYLKGEQNALTAAQIRGYELFKQHKCDTCHVGVAMGGQSFEYMGLFDDYFAARGTPLTEADQGRFAHTQDPADMHKF
KVPTLRNIALTAPYMHDARTSDLKEAVRIMLHYQSGKTLPNKDVEDISAFLESLTGEYQGKLLTKENQ

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=458, Percent_Identity=47.5982532751092, Blast_Score=420, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 51982; Mature: 51982

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKNLFFSVVAIAVASFLGTVGYVHIFDKEQSAKLLSQTPLSGQAQQVAKILYDNGCQY
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
CHSTNAELPFYAKFPVAESIMQEDIKKGTRVFLLNEILDGLKDPTKLSEVSLAKLEQVLI
HHCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHH
NDEMPVAKFVHLHWGSRPDLEEKTTLLNWIREQRQNHFLPANTQGTDPTRLVQPIPDSVA
CCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHC
TDPLKVALGDMLYHDGRLSGDGTIQCHTCHQLKNGGVDGLDVSVGIDGLKGGINAPTVYN
CCHHHHHHHHHHHCCCEECCCCEEEEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH
SVFNILQFWDGRAKDLAEQAGGPPLNPVEMGSKNWEDIIAKFEQDEAFKAKFLAVYPAIN
HHHHHHHHHCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCHHHHHHEEEEECCCC
EATITHAIAEFEKTLITPNSAFDRYLKGEQNALTAAQIRGYELFKQHKCDTCHVGVAMGG
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECC
QSFEYMGLFDDYFAARGTPLTEADQGRFAHTQDPADMHKFKVPTLRNIALTAPYMHDART
CCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHCCCH
SDLKEAVRIMLHYQSGKTLPNKDVEDISAFLESLTGEYQGKLLTKENQ
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHCCCEECCCCC
>Mature Secondary Structure
MRVKNLFFSVVAIAVASFLGTVGYVHIFDKEQSAKLLSQTPLSGQAQQVAKILYDNGCQY
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
CHSTNAELPFYAKFPVAESIMQEDIKKGTRVFLLNEILDGLKDPTKLSEVSLAKLEQVLI
HHCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHH
NDEMPVAKFVHLHWGSRPDLEEKTTLLNWIREQRQNHFLPANTQGTDPTRLVQPIPDSVA
CCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHC
TDPLKVALGDMLYHDGRLSGDGTIQCHTCHQLKNGGVDGLDVSVGIDGLKGGINAPTVYN
CCHHHHHHHHHHHCCCEECCCCEEEEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH
SVFNILQFWDGRAKDLAEQAGGPPLNPVEMGSKNWEDIIAKFEQDEAFKAKFLAVYPAIN
HHHHHHHHHCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCHHHHHHEEEEECCCC
EATITHAIAEFEKTLITPNSAFDRYLKGEQNALTAAQIRGYELFKQHKCDTCHVGVAMGG
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECC
QSFEYMGLFDDYFAARGTPLTEADQGRFAHTQDPADMHKFKVPTLRNIALTAPYMHDART
CCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHCCCH
SDLKEAVRIMLHYQSGKTLPNKDVEDISAFLESLTGEYQGKLLTKENQ
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]