Click here to switch to the map view.

The map label for this gene is qmcA [H]

Identifier: 15602754

GI number: 15602754

Start: 1043485

End: 1044408

Strand: Reverse

Name: qmcA [H]

Synonym: PM0889

Alternate gene names: 15602754

Gene position: 1044408-1043485 (Counterclockwise)

Preceding gene: 15602755

Following gene: 15602753

Centisome position: 46.26

GC content: 41.23

Gene sequence:

>924_bases
ATGGACTTTATTAATGGTTTACCAATCGCGACGATTTTCTTTATTGTATTGGTAATTTTTGTTTTGTATTCCACTTTAAA
AACCGTTCCACAGGGTTATCACTGGACGATTGAACGTTTTGGTCGCTACACTCGTACATTGACACCGGGTTTGAATTTTG
TGGTGCCTTTTATTGACCGTGTTGGTCGCCGTATCAATATGATGGAACAAGTGCTGGATATTCCTTCTCAAGAAGTCATT
TCGAAAGATAACGCGAATGTGTCGATTGATGCGGTTTGTTTTGTGCAAGTGATTGATGCACGTAACGCGGCTTATGAAGT
GAATCATTTAGAACAAGCGATTATTAATTTAACCATGACTAATATTCGTACTGTGTTAGGGTCAATGGAGTTAGATGAAA
TGTTATCACAACGTGATTCCATTAATAGCCGCTTGTTATCCATTGTTGATGAAGCCACTAATCCTTGGGGTATTAAAGTG
ACCCGTATTGAAATTCGTGATGTGCGTCCACCACAAGAATTGATCGCGGCGATGAACGCACAAATGAAAGCAGAACGTAA
CAAACGTGCGGATATTTTGGAAGCAGAAGGGGTACGTCAAGCGGAAATTTTACGTGCTGAAGGGGATAAACAAGCTCGTA
TCTTAAAAGCAGAAGGGGAACGTCAAGAAGCCTTCTTACAAGCTGAAGCTCGTGAACGTGCTGCTGAAGCAGAAGCCCGT
GCGACACAAATGGTGTCTGAAGCGATTGCGAGCGGGGACACGAAAGCAATTAACTATTTTATTGCACAAAAATATACTGA
GGCTTTAAAAGAAATTGGTGGCTCAGAAAACAGTAAAGTGGTGTTAATGCCACTCGAAGCGGGCAATTTAATCGGGTCTA
TTGCGGGTGTAGCTGAGTTATTAAAAGGCGATAAAAAAGCTTAA

Upstream 100 bases:

>100_bases
GTTTTGAATTTATAGCAGATAATAATCAATATTCTTATATACAAAGTACGCTCTAATTTGTTAGACTTTTTGTGATATTG
ACTTACTAAGGAGAACAGCA

Downstream 100 bases:

>100_bases
TCACTGTCGGTGAGGTAAATATGGAATGGTTTTCCACTTGGAGCCTTTGGCATTGGCTTATTTTAGGTTTTGTTTTATTA
ATTGCTGAATTAGTGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MDFINGLPIATIFFIVLVIFVLYSTLKTVPQGYHWTIERFGRYTRTLTPGLNFVVPFIDRVGRRINMMEQVLDIPSQEVI
SKDNANVSIDAVCFVQVIDARNAAYEVNHLEQAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLSIVDEATNPWGIKV
TRIEIRDVRPPQELIAAMNAQMKAERNKRADILEAEGVRQAEILRAEGDKQARILKAEGERQEAFLQAEARERAAEAEAR
ATQMVSEAIASGDTKAINYFIAQKYTEALKEIGGSENSKVVLMPLEAGNLIGSIAGVAELLKGDKKA

Sequences:

>Translated_307_residues
MDFINGLPIATIFFIVLVIFVLYSTLKTVPQGYHWTIERFGRYTRTLTPGLNFVVPFIDRVGRRINMMEQVLDIPSQEVI
SKDNANVSIDAVCFVQVIDARNAAYEVNHLEQAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLSIVDEATNPWGIKV
TRIEIRDVRPPQELIAAMNAQMKAERNKRADILEAEGVRQAEILRAEGDKQARILKAEGERQEAFLQAEARERAAEAEAR
ATQMVSEAIASGDTKAINYFIAQKYTEALKEIGGSENSKVVLMPLEAGNLIGSIAGVAELLKGDKKA
>Mature_307_residues
MDFINGLPIATIFFIVLVIFVLYSTLKTVPQGYHWTIERFGRYTRTLTPGLNFVVPFIDRVGRRINMMEQVLDIPSQEVI
SKDNANVSIDAVCFVQVIDARNAAYEVNHLEQAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLSIVDEATNPWGIKV
TRIEIRDVRPPQELIAAMNAQMKAERNKRADILEAEGVRQAEILRAEGDKQARILKAEGERQEAFLQAEARERAAEAEAR
ATQMVSEAIASGDTKAINYFIAQKYTEALKEIGGSENSKVVLMPLEAGNLIGSIAGVAELLKGDKKA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=296, Percent_Identity=33.445945945946, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI21686995, Length=189, Percent_Identity=33.8624338624339, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI221316744, Length=189, Percent_Identity=33.8624338624339, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI38016911, Length=225, Percent_Identity=32.8888888888889, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7657615, Length=187, Percent_Identity=30.4812834224599, Blast_Score=95, Evalue=8e-20,
Organism=Escherichia coli, GI1786697, Length=295, Percent_Identity=80, Blast_Score=490, Evalue=1e-140,
Organism=Escherichia coli, GI1790616, Length=284, Percent_Identity=24.6478873239437, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI32564147, Length=298, Percent_Identity=34.8993288590604, Blast_Score=177, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17569493, Length=192, Percent_Identity=35.4166666666667, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI193209764, Length=192, Percent_Identity=35.4166666666667, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17569499, Length=225, Percent_Identity=36, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71989955, Length=161, Percent_Identity=37.2670807453416, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71989948, Length=161, Percent_Identity=37.2670807453416, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71987612, Length=199, Percent_Identity=35.678391959799, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=199, Percent_Identity=35.678391959799, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71987621, Length=225, Percent_Identity=34.2222222222222, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17570459, Length=214, Percent_Identity=35.0467289719626, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=199, Percent_Identity=30.1507537688442, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI193210507, Length=198, Percent_Identity=35.8585858585859, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17570161, Length=198, Percent_Identity=35.8585858585859, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=236, Percent_Identity=33.0508474576271, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71989963, Length=126, Percent_Identity=34.9206349206349, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45550506, Length=272, Percent_Identity=37.8676470588235, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI62484448, Length=195, Percent_Identity=35.3846153846154, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281365664, Length=195, Percent_Identity=35.3846153846154, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI62484274, Length=195, Percent_Identity=35.3846153846154, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24657857, Length=195, Percent_Identity=35.3846153846154, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI45556022, Length=149, Percent_Identity=38.9261744966443, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI18860517, Length=194, Percent_Identity=30.4123711340206, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28573263, Length=195, Percent_Identity=28.2051282051282, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21356845, Length=193, Percent_Identity=27.4611398963731, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281361633, Length=192, Percent_Identity=28.125, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281361631, Length=192, Percent_Identity=28.125, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI281361635, Length=131, Percent_Identity=25.9541984732824, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34179; Mature: 34179

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFINGLPIATIFFIVLVIFVLYSTLKTVPQGYHWTIERFGRYTRTLTPGLNFVVPFIDR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHH
VGRRINMMEQVLDIPSQEVISKDNANVSIDAVCFVQVIDARNAAYEVNHLEQAIINLTMT
HHHHHHHHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NIRTVLGSMELDEMLSQRDSINSRLLSIVDEATNPWGIKVTRIEIRDVRPPQELIAAMNA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHH
QMKAERNKRADILEAEGVRQAEILRAEGDKQARILKAEGERQEAFLQAEARERAAEAEAR
HHHHHHCCCCCHHHHCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
ATQMVSEAIASGDTKAINYFIAQKYTEALKEIGGSENSKVVLMPLEAGNLIGSIAGVAEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
LKGDKKA
HCCCCCC
>Mature Secondary Structure
MDFINGLPIATIFFIVLVIFVLYSTLKTVPQGYHWTIERFGRYTRTLTPGLNFVVPFIDR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHH
VGRRINMMEQVLDIPSQEVISKDNANVSIDAVCFVQVIDARNAAYEVNHLEQAIINLTMT
HHHHHHHHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NIRTVLGSMELDEMLSQRDSINSRLLSIVDEATNPWGIKVTRIEIRDVRPPQELIAAMNA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHH
QMKAERNKRADILEAEGVRQAEILRAEGDKQARILKAEGERQEAFLQAEARERAAEAEAR
HHHHHHCCCCCHHHHCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
ATQMVSEAIASGDTKAINYFIAQKYTEALKEIGGSENSKVVLMPLEAGNLIGSIAGVAEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
LKGDKKA
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]