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The map label for this gene is ygdK [C]

Identifier: 15602748

GI number: 15602748

Start: 1038344

End: 1038721

Strand: Direct

Name: ygdK [C]

Synonym: PM0883

Alternate gene names: 15602748

Gene position: 1038344-1038721 (Clockwise)

Preceding gene: 15602747

Following gene: 15602750

Centisome position: 46.0

GC content: 41.01

Gene sequence:

>378_bases
ATGAAAGAACAACTCCTTAACGCAAAAAGCTGGGAAGAACGTTACCGCCTGATTATCCAAGCCGGCAAACAGCTACCATT
CCCCACAGAACAACAACTCGCCGAGATGCAACCGATTTCAGGTTGTGAAGCAAAAGTCTGGTTTAAAATTACTGGAAAAA
ATGACCGCACTTTTGATTTTCAAGCTTACAGCGAAGCCCGTATTATTAATGGGTTATTGTGGATTTTACTGCAAGAAATT
CAGGGCAAAACAGTCGAACAGCTCAAGCAGTTTGATTTAACTGCCTATTTCACTGAATTGGGCATTGCACAACGGTTAAG
CAGCACAAGGCTAAATGGGCTAAAACAGATTGAAAAATTGTTACATCAGCTAGAGTAA

Upstream 100 bases:

>100_bases
CAGCACTTTGCGGCTGTCCTTTGCACCTTATAACCAACAAGCGGATGTTGATGCGTTTTTCTCTGCCCTTGACAACGCTT
TAGCCTTATTAGATTAAATG

Downstream 100 bases:

>100_bases
AAGTGTGGCTGAGATTAAAAAGGGCGGTGTATTTTAAAAAAATTTCTTCCCCCAAAAGTGACTTTCCCCCTTTCCCTTAT
TTTTCGCTGTAGCGGTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKEQLLNAKSWEERYRLIIQAGKQLPFPTEQQLAEMQPISGCEAKVWFKITGKNDRTFDFQAYSEARIINGLLWILLQEI
QGKTVEQLKQFDLTAYFTELGIAQRLSSTRLNGLKQIEKLLHQLE

Sequences:

>Translated_125_residues
MKEQLLNAKSWEERYRLIIQAGKQLPFPTEQQLAEMQPISGCEAKVWFKITGKNDRTFDFQAYSEARIINGLLWILLQEI
QGKTVEQLKQFDLTAYFTELGIAQRLSSTRLNGLKQIEKLLHQLE
>Mature_125_residues
MKEQLLNAKSWEERYRLIIQAGKQLPFPTEQQLAEMQPISGCEAKVWFKITGKNDRTFDFQAYSEARIINGLLWILLQEI
QGKTVEQLKQFDLTAYFTELGIAQRLSSTRLNGLKQIEKLLHQLE

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1789176, Length=111, Percent_Identity=37.8378378378378, Blast_Score=83, Evalue=5e-18,
Organism=Escherichia coli, GI1787969, Length=111, Percent_Identity=27.027027027027, Blast_Score=63, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 14585; Mature: 14585

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQLLNAKSWEERYRLIIQAGKQLPFPTEQQLAEMQPISGCEAKVWFKITGKNDRTFDF
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCCCEEEH
QAYSEARIINGLLWILLQEIQGKTVEQLKQFDLTAYFTELGIAQRLSSTRLNGLKQIEKL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHQLE
HHHCC
>Mature Secondary Structure
MKEQLLNAKSWEERYRLIIQAGKQLPFPTEQQLAEMQPISGCEAKVWFKITGKNDRTFDF
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCCCEEEH
QAYSEARIINGLLWILLQEIQGKTVEQLKQFDLTAYFTELGIAQRLSSTRLNGLKQIEKL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHQLE
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]