Click here to switch to the map view.

The map label for this gene is tadD

Identifier: 15602711

GI number: 15602711

Start: 997576

End: 998349

Strand: Reverse

Name: tadD

Synonym: PM0846

Alternate gene names: NA

Gene position: 998349-997576 (Counterclockwise)

Preceding gene: 15602712

Following gene: 15602710

Centisome position: 44.22

GC content: 31.01

Gene sequence:

>774_bases
ATGTTTTTTAAATTTACCAAGAAAATCGTTTTTGTTAGTTTAGCTTTATCTGTCGTTGGTTGTGCTACCCATTCTCAGCA
AGGTATGGCACAGAAAAGTATGTCCTCTGAGGCGATAACGGCAAAAGAAACTTTATATGAAAGTACACAAAATTATTCGG
CACTCATTTCACTGTATCGGGATGTGCTGAAAGCCAAAGAAGATCCTTCAATACGCTATAAATTAGCGAAGACATACTAT
CAGCGAGGTGACAGCAAATCTTCTTTACTTTATTTAACGCCATTACTGAATGATAATACGAAGCTTGCTACGCAAGCGAA
AATATTACAAATAAAAAATCTAATTCAATTAAATAATTTCCAAGAAGCAATTTCTGTTGCAAATGAACTCTTATTAAAAT
CACCTAATGAAGGAGAAGTATATAATTTAAGAGGTATCGCTTATGCGCAAAATGGGAATTTAGTGAATGCTAGAAATGAT
ATTAATAAAGCAAGAGAGTTCTTTATTAATGATAATGTTGCTATTAATAATTTAGCCATGCTAAATATTATTAATGGTGA
TTTTAGTAATGCTGTTTCTTTACTGTTGCCACAATATTTAAACGGTGTTAAGAATTCTCGATTGATTCATAATCTTGTTT
TTGCTTTAGTTAAAAATGGTGATCTTGATTATGCAAAAGATATCATTGTTAAAGAGCGTTTAAATACTTCACCAGATGAT
TTAATTAATGCATTGAAAAAAACTACACACGTATCAAAAGGTGTAACTCGATAA

Upstream 100 bases:

>100_bases
GGTACATTATCAGCTAAGATGAGTATCCCATTGATTTTGTTTATTATGTTCCCAATAATTATTTTAATTCTAGCACCAGG
TATAATGAGGGTATTTCCAA

Downstream 100 bases:

>100_bases
TACTAAGGATTTGATATGAAAAAATTTCTATCAAATATAAAGGGAGCCTCGTCAGTTGAGTTTGCTTTGACGATAGCGTT
CTATTTATTTATTGTCATGT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Secretion System Protein; Flp Pilus Assembly Protein Tadd Contains Tpr Repeat; Tight Adherance Operon Protein D; Tight Adherance Operon Protein; NrfG Protein

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MFFKFTKKIVFVSLALSVVGCATHSQQGMAQKSMSSEAITAKETLYESTQNYSALISLYRDVLKAKEDPSIRYKLAKTYY
QRGDSKSSLLYLTPLLNDNTKLATQAKILQIKNLIQLNNFQEAISVANELLLKSPNEGEVYNLRGIAYAQNGNLVNARND
INKAREFFINDNVAINNLAMLNIINGDFSNAVSLLLPQYLNGVKNSRLIHNLVFALVKNGDLDYAKDIIVKERLNTSPDD
LINALKKTTHVSKGVTR

Sequences:

>Translated_257_residues
MFFKFTKKIVFVSLALSVVGCATHSQQGMAQKSMSSEAITAKETLYESTQNYSALISLYRDVLKAKEDPSIRYKLAKTYY
QRGDSKSSLLYLTPLLNDNTKLATQAKILQIKNLIQLNNFQEAISVANELLLKSPNEGEVYNLRGIAYAQNGNLVNARND
INKAREFFINDNVAINNLAMLNIINGDFSNAVSLLLPQYLNGVKNSRLIHNLVFALVKNGDLDYAKDIIVKERLNTSPDD
LINALKKTTHVSKGVTR
>Mature_257_residues
MFFKFTKKIVFVSLALSVVGCATHSQQGMAQKSMSSEAITAKETLYESTQNYSALISLYRDVLKAKEDPSIRYKLAKTYY
QRGDSKSSLLYLTPLLNDNTKLATQAKILQIKNLIQLNNFQEAISVANELLLKSPNEGEVYNLRGIAYAQNGNLVNARND
INKAREFFINDNVAINNLAMLNIINGDFSNAVSLLLPQYLNGVKNSRLIHNLVFALVKNGDLDYAKDIIVKERLNTSPDD
LINALKKTTHVSKGVTR

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28711; Mature: 28711

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKFTKKIVFVSLALSVVGCATHSQQGMAQKSMSSEAITAKETLYESTQNYSALISLYR
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DVLKAKEDPSIRYKLAKTYYQRGDSKSSLLYLTPLLNDNTKLATQAKILQIKNLIQLNNF
HHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCH
QEAISVANELLLKSPNEGEVYNLRGIAYAQNGNLVNARNDINKAREFFINDNVAINNLAM
HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEECCHHHHHHHHHHHCCCCEEECCEEE
LNIINGDFSNAVSLLLPQYLNGVKNSRLIHNLVFALVKNGDLDYAKDIIVKERLNTSPDD
EEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
LINALKKTTHVSKGVTR
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFFKFTKKIVFVSLALSVVGCATHSQQGMAQKSMSSEAITAKETLYESTQNYSALISLYR
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DVLKAKEDPSIRYKLAKTYYQRGDSKSSLLYLTPLLNDNTKLATQAKILQIKNLIQLNNF
HHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCH
QEAISVANELLLKSPNEGEVYNLRGIAYAQNGNLVNARNDINKAREFFINDNVAINNLAM
HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEECCHHHHHHHHHHHCCCCEEECCEEE
LNIINGDFSNAVSLLLPQYLNGVKNSRLIHNLVFALVKNGDLDYAKDIIVKERLNTSPDD
EEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
LINALKKTTHVSKGVTR
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA