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The map label for this gene is ydiI [C]

Identifier: 15602653

GI number: 15602653

Start: 932926

End: 933345

Strand: Direct

Name: ydiI [C]

Synonym: PM0788

Alternate gene names: 15602653

Gene position: 932926-933345 (Clockwise)

Preceding gene: 15602652

Following gene: 15602654

Centisome position: 41.33

GC content: 41.9

Gene sequence:

>420_bases
ATGATTTGGAAAAAAAAATATACGCTTGAGCAAATGAACTTGCTTAGCCAAAACACCGCTATTTCGCACCTTGCCATTCA
GTTTAGTGCACAAGGGGAAAACTGGTTGGAAGCCACTATGCCAGTGGATCAACGTACCATTCAACCCATGGGATTTTTGC
ATGGTGGCCTTTCAGTTGCATTGGCAGAAACAATTGGATCAATGGCGGGTTTTTGTTGTATAACTGAAAACCAGTTTGTA
TTGGGCTTAGAAATCAATGCCAATCACTTACGTCCAGTCAAACAAGGGATCGTGACAGCCAGAGCGACACCCATTCATTT
AGGCACACGAACACAGGTTTGGCAAATTGAAATCAAAGATCAGCAAGATCAACTTTGTTGTCTTTCTCGTTTAACGCTTT
CAGTGGGGAATCATGAATAA

Upstream 100 bases:

>100_bases
TGTTTAGCAACGGGTTATTCTTGCCGTAGTCAAGTGAAACGCTTAGAAAAATGGCAACCTCAACATCCCGTACAAGCCTT
ACTCAGTTTATTAAAATAAA

Downstream 100 bases:

>100_bases
AGCAAAAACTGGGGTTTTATTGGTGAATTTAGGTACACCAGAAAGCCCTACACCAAAGGCTATCTCTCGTTATTTATGGC
AATTTTTAACTGATCCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIWKKKYTLEQMNLLSQNTAISHLAIQFSAQGENWLEATMPVDQRTIQPMGFLHGGLSVALAETIGSMAGFCCITENQFV
LGLEINANHLRPVKQGIVTARATPIHLGTRTQVWQIEIKDQQDQLCCLSRLTLSVGNHE

Sequences:

>Translated_139_residues
MIWKKKYTLEQMNLLSQNTAISHLAIQFSAQGENWLEATMPVDQRTIQPMGFLHGGLSVALAETIGSMAGFCCITENQFV
LGLEINANHLRPVKQGIVTARATPIHLGTRTQVWQIEIKDQQDQLCCLSRLTLSVGNHE
>Mature_139_residues
MIWKKKYTLEQMNLLSQNTAISHLAIQFSAQGENWLEATMPVDQRTIQPMGFLHGGLSVALAETIGSMAGFCCITENQFV
LGLEINANHLRPVKQGIVTARATPIHLGTRTQVWQIEIKDQQDQLCCLSRLTLSVGNHE

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family

Homologues:

Organism=Escherichia coli, GI1787976, Length=135, Percent_Identity=54.8148148148148, Blast_Score=160, Evalue=4e-41,
Organism=Escherichia coli, GI1786813, Length=135, Percent_Identity=50.3703703703704, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y788_PASMU (Q9CMM9)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245725.1
- ProteinModelPortal:   Q9CMM9
- SMR:   Q9CMM9
- GeneID:   1244135
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0788
- NMPDR:   fig|272843.1.peg.788
- HOGENOM:   HBG657960
- OMA:   ANHLKAS
- BioCyc:   PMUL272843:PM0788-MONOMER
- InterPro:   IPR003736
- InterPro:   IPR006683
- TIGRFAMs:   TIGR00369

Pfam domain/function: PF03061 4HBT

EC number: NA

Molecular weight: Translated: 15488; Mature: 15488

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWKKKYTLEQMNLLSQNTAISHLAIQFSAQGENWLEATMPVDQRTIQPMGFLHGGLSVA
CCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCHHCCCCHHHHCCHHHH
LAETIGSMAGFCCITENQFVLGLEINANHLRPVKQGIVTARATPIHLGTRTQVWQIEIKD
HHHHHHHHHCEEEEECCCEEEEEEECCCCCCHHHHCEEEECCCEEEECCCCEEEEEEECC
QQDQLCCLSRLTLSVGNHE
CCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIWKKKYTLEQMNLLSQNTAISHLAIQFSAQGENWLEATMPVDQRTIQPMGFLHGGLSVA
CCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCHHCCCCHHHHCCHHHH
LAETIGSMAGFCCITENQFVLGLEINANHLRPVKQGIVTARATPIHLGTRTQVWQIEIKD
HHHHHHHHHCEEEEECCCEEEEEEECCCCCCHHHHCEEEECCCEEEECCCCEEEEEEECC
QQDQLCCLSRLTLSVGNHE
CCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100