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The map label for this gene is ydgA [C]

Identifier: 15602600

GI number: 15602600

Start: 864252

End: 865679

Strand: Reverse

Name: ydgA [C]

Synonym: PM0735

Alternate gene names: 15602600

Gene position: 865679-864252 (Counterclockwise)

Preceding gene: 15602607

Following gene: 15602598

Centisome position: 38.35

GC content: 37.54

Gene sequence:

>1428_bases
ATGAAAAAATCATTAGTTGCATTAGGTGTTATTGTTGCGTTAGGGGCTGTTTGGACGGGGAGTGCATGGTATACCGGAAA
ATCAGTGGAAGAAAGTGCGCAACAACGTTTAGATTTAATTAATGCGAAGTTTGTTGGTGCCAAACCAGGGAGCGAAGTGA
AATTCGACAATTTAAAAATTGAACGCGGCATTTTTAGTTCAAACGTTACTTATGATTTTGTTGCAGCCTTTCCTGATATG
AGCTTCAAAATTCCTTTTGAAAGTACGGTATATCATGGACCTTTCCCATTAGATCGTATTACGCATTTTGATTTAGTGCC
TATTTTATTTTCAACCCATGATCGCATTGTCAAAAATGAAGATACGCAAGCTTGGTTTGATTATGCACAAGGGCAGAATC
CTTTTGAAAGTAAAATTAAAGTCGGTTTTGATTCTACTTTTACAGGACAGGTTAAAATTGCACCTGCAAAATTAGCATTC
AGCGATGTTGATATTGTTTGGAAAGGCGTTGATGTTAACTTTAATAAGCTTACCGCCGAAGGTGTGGGACAATCTGATGC
GAATATTGATGGATTGAAATTCCTATTCGAGAGTGATGATAATAACGCTAAAACATTGGTTGAATTGAATAATATTAAAG
CAAAAAGTGATTTAAAACATTCTGAGTGGGAACATATTCCATTAGGTAAACAAACCATGGAAGTGGACAGTTTCCGTCTC
TCACTTTCTGAGCAAGACATGAGAGAGTTTAATGTTGAATACCGAAACATGTCATTAGATATTAATACACAAAAGAATGA
TGCTTTTGTTGACTATAACGTGTTCACTAAAGCCCCAGAAATGTTAGTCAATGGCAAGTCTGTGGGTGAGTTTCAGGCTG
GGGTGAAATTAGCACATGTTGAAGGGAATACGATGAATACCCTTTTCGATATAGTGGAAAAAACAGCAGAACATGAAGCG
TTACCAGATGATCAAATTCAAGCATTAGCCAAAACCATTTTAAAGAACCAGCCATTATTACAGATTGAGCCATTCAAACT
CACGACGGATGGGGGCGATCTGAAAGCAAATCTTGTGGTGGAAATGGCAAATGGCGATGTCGACATGTTAGAGCAAGGTA
AAGTCTTATCGCTATTTAAGCAATTGGCGGTGAATGTCGATTTAAGTAAAGACGCTATGATCAAACTGTTAGCCATGACA
GAAGAAGCGCAAGGTAAAAACAAAGAAGAAGCCATGTTAAGCGCGACACAAATAATGGAAGAAACCTTTGCGGAGACGAT
TAATCAAGGCGTTTTTGTGGAGAATGAAAAAACGATTAATTTAGGGTTGTTACTCGAAAACGATGCACTTAAATTAAATG
GACAACCAATTCCAGAAGAACAAATCTTAATGATGGTGGTACTCTTTTTCTTAGGGATGGGATATTAG

Upstream 100 bases:

>100_bases
TTCTATAAACTAGACAGATAGAAAAGAAGATATTTTATACAATCTGGATTTGTGGTAAATTGAGTGCTTTCATCACATCG
TTAATTTAGGAAATTTATTT

Downstream 100 bases:

>100_bases
TTATTGGTAAAAGTGCGGTGACTTTTTTCGTTTTTTCCGCACGCTAAAAATAGAGGGGATACAATTGTGTATCCCCTGAT
TTATTTTGTACTCGAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKKSLVALGVIVALGAVWTGSAWYTGKSVEESAQQRLDLINAKFVGAKPGSEVKFDNLKIERGIFSSNVTYDFVAAFPDM
SFKIPFESTVYHGPFPLDRITHFDLVPILFSTHDRIVKNEDTQAWFDYAQGQNPFESKIKVGFDSTFTGQVKIAPAKLAF
SDVDIVWKGVDVNFNKLTAEGVGQSDANIDGLKFLFESDDNNAKTLVELNNIKAKSDLKHSEWEHIPLGKQTMEVDSFRL
SLSEQDMREFNVEYRNMSLDINTQKNDAFVDYNVFTKAPEMLVNGKSVGEFQAGVKLAHVEGNTMNTLFDIVEKTAEHEA
LPDDQIQALAKTILKNQPLLQIEPFKLTTDGGDLKANLVVEMANGDVDMLEQGKVLSLFKQLAVNVDLSKDAMIKLLAMT
EEAQGKNKEEAMLSATQIMEETFAETINQGVFVENEKTINLGLLLENDALKLNGQPIPEEQILMMVVLFFLGMGY

Sequences:

>Translated_475_residues
MKKSLVALGVIVALGAVWTGSAWYTGKSVEESAQQRLDLINAKFVGAKPGSEVKFDNLKIERGIFSSNVTYDFVAAFPDM
SFKIPFESTVYHGPFPLDRITHFDLVPILFSTHDRIVKNEDTQAWFDYAQGQNPFESKIKVGFDSTFTGQVKIAPAKLAF
SDVDIVWKGVDVNFNKLTAEGVGQSDANIDGLKFLFESDDNNAKTLVELNNIKAKSDLKHSEWEHIPLGKQTMEVDSFRL
SLSEQDMREFNVEYRNMSLDINTQKNDAFVDYNVFTKAPEMLVNGKSVGEFQAGVKLAHVEGNTMNTLFDIVEKTAEHEA
LPDDQIQALAKTILKNQPLLQIEPFKLTTDGGDLKANLVVEMANGDVDMLEQGKVLSLFKQLAVNVDLSKDAMIKLLAMT
EEAQGKNKEEAMLSATQIMEETFAETINQGVFVENEKTINLGLLLENDALKLNGQPIPEEQILMMVVLFFLGMGY
>Mature_475_residues
MKKSLVALGVIVALGAVWTGSAWYTGKSVEESAQQRLDLINAKFVGAKPGSEVKFDNLKIERGIFSSNVTYDFVAAFPDM
SFKIPFESTVYHGPFPLDRITHFDLVPILFSTHDRIVKNEDTQAWFDYAQGQNPFESKIKVGFDSTFTGQVKIAPAKLAF
SDVDIVWKGVDVNFNKLTAEGVGQSDANIDGLKFLFESDDNNAKTLVELNNIKAKSDLKHSEWEHIPLGKQTMEVDSFRL
SLSEQDMREFNVEYRNMSLDINTQKNDAFVDYNVFTKAPEMLVNGKSVGEFQAGVKLAHVEGNTMNTLFDIVEKTAEHEA
LPDDQIQALAKTILKNQPLLQIEPFKLTTDGGDLKANLVVEMANGDVDMLEQGKVLSLFKQLAVNVDLSKDAMIKLLAMT
EEAQGKNKEEAMLSATQIMEETFAETINQGVFVENEKTINLGLLLENDALKLNGQPIPEEQILMMVVLFFLGMGY

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgA and yihF [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=512, Percent_Identity=24.8046875, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87082339, Length=488, Percent_Identity=21.9262295081967, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 52906; Mature: 52906

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLVALGVIVALGAVWTGSAWYTGKSVEESAQQRLDLINAKFVGAKPGSEVKFDNLKI
CCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCEEECCCCCCCEEECCEEE
ERGIFSSNVTYDFVAAFPDMSFKIPFESTVYHGPFPLDRITHFDLVPILFSTHDRIVKNE
ECCCCCCCCCEEEEEECCCCEEECCCCCCEECCCCCHHHHCCHHHHHHHHCCCCHHCCCC
DTQAWFDYAQGQNPFESKIKVGFDSTFTGQVKIAPAKLAFSDVDIVWKGVDVNFNKLTAE
CCHHHHHHHCCCCCCCCCEEECCCCEECCEEEEEEHEEEECCEEEEEEECCCCHHEEEEC
GVGQSDANIDGLKFLFESDDNNAKTLVELNNIKAKSDLKHSEWEHIPLGKQTMEVDSFRL
CCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHEEE
SLSEQDMREFNVEYRNMSLDINTQKNDAFVDYNVFTKAPEMLVNGKSVGEFQAGVKLAHV
ECCHHHHHHHCCEEEEEEEEEECCCCCEEEEEEHHHCCCHHHCCCCCCCCHHHCEEEEEE
EGNTMNTLFDIVEKTAEHEALPDDQIQALAKTILKNQPLLQIEPFKLTTDGGDLKANLVV
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECEEEECCCCCEEEEEEE
EMANGDVDMLEQGKVLSLFKQLAVNVDLSKDAMIKLLAMTEEAQGKNKEEAMLSATQIME
EEECCCHHHHHCCHHHHHHHHHHCCCCCCHHHHEEHHHHHHHHCCCCHHHHHHHHHHHHH
ETFAETINQGVFVENEKTINLGLLLENDALKLNGQPIPEEQILMMVVLFFLGMGY
HHHHHHHHCCEEEECCCEEEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKSLVALGVIVALGAVWTGSAWYTGKSVEESAQQRLDLINAKFVGAKPGSEVKFDNLKI
CCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCEEECCCCCCCEEECCEEE
ERGIFSSNVTYDFVAAFPDMSFKIPFESTVYHGPFPLDRITHFDLVPILFSTHDRIVKNE
ECCCCCCCCCEEEEEECCCCEEECCCCCCEECCCCCHHHHCCHHHHHHHHCCCCHHCCCC
DTQAWFDYAQGQNPFESKIKVGFDSTFTGQVKIAPAKLAFSDVDIVWKGVDVNFNKLTAE
CCHHHHHHHCCCCCCCCCEEECCCCEECCEEEEEEHEEEECCEEEEEEECCCCHHEEEEC
GVGQSDANIDGLKFLFESDDNNAKTLVELNNIKAKSDLKHSEWEHIPLGKQTMEVDSFRL
CCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHEEE
SLSEQDMREFNVEYRNMSLDINTQKNDAFVDYNVFTKAPEMLVNGKSVGEFQAGVKLAHV
ECCHHHHHHHCCEEEEEEEEEECCCCCEEEEEEHHHCCCHHHCCCCCCCCHHHCEEEEEE
EGNTMNTLFDIVEKTAEHEALPDDQIQALAKTILKNQPLLQIEPFKLTTDGGDLKANLVV
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECEEEECCCCCEEEEEEE
EMANGDVDMLEQGKVLSLFKQLAVNVDLSKDAMIKLLAMTEEAQGKNKEEAMLSATQIME
EEECCCHHHHHCCHHHHHHHHHHCCCCCCHHHHEEHHHHHHHHCCCCHHHHHHHHHHHHH
ETFAETINQGVFVENEKTINLGLLLENDALKLNGQPIPEEQILMMVVLFFLGMGY
HHHHHHHHCCEEEECCCEEEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]