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The map label for this gene is oppA [C]

Identifier: 15602543

GI number: 15602543

Start: 786475

End: 788046

Strand: Reverse

Name: oppA [C]

Synonym: PM0678

Alternate gene names: 15602543

Gene position: 788046-786475 (Counterclockwise)

Preceding gene: 15602544

Following gene: 15602541

Centisome position: 34.91

GC content: 40.84

Gene sequence:

>1572_bases
ATGTTTAGCGATGCATCTTTTTCTCGTTACAAGACAAATATGATGACACACTTAAAAAGTGCGGTCTTTTCGGGGCTAAT
TTTTTGCCTCACAGCTTGTGATCAACCGACCTCTGTGTCTTCCTCCCTTTCTGCTCCCCCTGTATCAGACATGACACCGA
GTCGCGAAAAATTAACGCGTGCGGTTTATCATGATTTGATCCTCAATCCTCATCAAATGACGAATGCAGAACAAGCTATT
TTTTTGCAAGATTTACTGGAAGGTTTGACCGCCTATGACACGGCGGGTCATCCTGTGCCGGCGGTGGCGGAGAGTTGGCA
GTCAGAAGACTATAAAACCTGGTTTTTCATTTTACGTGAGGGAGCACAATGGTCGAATGGTGACGCGGTAACAGCACAGG
ATTTTGTACACAGTTGGCAAAATCTAGCCAGCTCTACCAGTCCACTGAAAACTTATTTAGCTTTTCTAAATTTAGCCAAT
GCAGACGCTGTTTTAAAAGGTAGCATGCCGGTTGCAGACTTGGGCATTGAAGCAATAGAGCATCGTGTGCTACGTATTCA
GTTAGATAAACCGACGCCAGCATTACCAGCAATGTTGGCTCATGTCGCGTTATTACCAACTTATCAGAAAGAAAGTGCGC
AATTTGTGAGTAATGGTGCTTATCGGTTAGTGAATCAACAGGATGATTTCATTCATTTAGAAAAAAATCCTCATTATTGG
GCGCATCAAAAAGTGTCGTTTAAGTTTGTGGATTATCAAAAAATTAGTGCATCGCAACCGGTGTCAAATATAGATTGGGT
GTTAGCACCACAACATACACTTACACCACTTCAATATTTCCCGACACTTTGTACGCATTATTATGAATTTAATCTTAAGC
ATCCATTATTACAAAAAAGTGCGGTGCGAAAAGCATTAATTTCGATGATTTCAACTCGGAGTATTGTGCAGGATGTGGTG
CCTTACATGCAAGCGACAACCCAGTTTTTACCTTATTCGATGCAAATGGATTCTGATTTGGCTTGGGAACCTGTCGTGGT
AGAACAAGTACTGGAGCAACAAGGTATTACAGAAAGTAAACCTTTGCAATTTACCCTGACGTATGATCAACAGCCACCGA
ATGTAGAGATCGCGCAACGCTTAATTCGTATGTGGTCACAATCAGATATGATTAGAGTGAAGGCACAGCCAGTTGCTTGG
CAACAGTTATTGGAAAAACGGGCGAAACGTGATTTTGAAGTGATACGTTCCGGTTGGTGTGCAGATTACAATGAGCCTTC
AGCTTTTTTAAATATTTTTTATTCACAAGCTGCCGATAATCAAGCCGGTTATCATCATGCAGAGGTGGATAAATTATTAG
AACAAACGCTTTTACTTCAAACAGAAACAGAGCGAAAACATTTATACAGCAAAATTACTACTCAATTACAGCAAGATTAT
GTCGTGTTACCCATTTTCCAATATACAACCCCCATTTTTATCCATCCAACAGTGACAGGCTATCATCTTGATAACCCTAC
AGGAACGATGTATAGCAAAGATTTATACCGTAAGGTCAGTGAGCATAAATAA

Upstream 100 bases:

>100_bases
AATATTGGTTCTTTTTCTTTTGGATTAAAACAGTAAAGCAATAATTGGTATTCGCTAAGCATTGTTTGTATAATGAACAT
CATTTTTCAGGAAAAACAAT

Downstream 100 bases:

>100_bases
TATGCGCTCTATTGATTGCACATGCCCCACTGATTGAGTGGGGCATTGCGTTTATTTCTCTTGCACAGGAACTTCTTCTG
AGCAATAAGGGCACTCAAGT

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MFSDASFSRYKTNMMTHLKSAVFSGLIFCLTACDQPTSVSSSLSAPPVSDMTPSREKLTRAVYHDLILNPHQMTNAEQAI
FLQDLLEGLTAYDTAGHPVPAVAESWQSEDYKTWFFILREGAQWSNGDAVTAQDFVHSWQNLASSTSPLKTYLAFLNLAN
ADAVLKGSMPVADLGIEAIEHRVLRIQLDKPTPALPAMLAHVALLPTYQKESAQFVSNGAYRLVNQQDDFIHLEKNPHYW
AHQKVSFKFVDYQKISASQPVSNIDWVLAPQHTLTPLQYFPTLCTHYYEFNLKHPLLQKSAVRKALISMISTRSIVQDVV
PYMQATTQFLPYSMQMDSDLAWEPVVVEQVLEQQGITESKPLQFTLTYDQQPPNVEIAQRLIRMWSQSDMIRVKAQPVAW
QQLLEKRAKRDFEVIRSGWCADYNEPSAFLNIFYSQAADNQAGYHHAEVDKLLEQTLLLQTETERKHLYSKITTQLQQDY
VVLPIFQYTTPIFIHPTVTGYHLDNPTGTMYSKDLYRKVSEHK

Sequences:

>Translated_523_residues
MFSDASFSRYKTNMMTHLKSAVFSGLIFCLTACDQPTSVSSSLSAPPVSDMTPSREKLTRAVYHDLILNPHQMTNAEQAI
FLQDLLEGLTAYDTAGHPVPAVAESWQSEDYKTWFFILREGAQWSNGDAVTAQDFVHSWQNLASSTSPLKTYLAFLNLAN
ADAVLKGSMPVADLGIEAIEHRVLRIQLDKPTPALPAMLAHVALLPTYQKESAQFVSNGAYRLVNQQDDFIHLEKNPHYW
AHQKVSFKFVDYQKISASQPVSNIDWVLAPQHTLTPLQYFPTLCTHYYEFNLKHPLLQKSAVRKALISMISTRSIVQDVV
PYMQATTQFLPYSMQMDSDLAWEPVVVEQVLEQQGITESKPLQFTLTYDQQPPNVEIAQRLIRMWSQSDMIRVKAQPVAW
QQLLEKRAKRDFEVIRSGWCADYNEPSAFLNIFYSQAADNQAGYHHAEVDKLLEQTLLLQTETERKHLYSKITTQLQQDY
VVLPIFQYTTPIFIHPTVTGYHLDNPTGTMYSKDLYRKVSEHK
>Mature_523_residues
MFSDASFSRYKTNMMTHLKSAVFSGLIFCLTACDQPTSVSSSLSAPPVSDMTPSREKLTRAVYHDLILNPHQMTNAEQAI
FLQDLLEGLTAYDTAGHPVPAVAESWQSEDYKTWFFILREGAQWSNGDAVTAQDFVHSWQNLASSTSPLKTYLAFLNLAN
ADAVLKGSMPVADLGIEAIEHRVLRIQLDKPTPALPAMLAHVALLPTYQKESAQFVSNGAYRLVNQQDDFIHLEKNPHYW
AHQKVSFKFVDYQKISASQPVSNIDWVLAPQHTLTPLQYFPTLCTHYYEFNLKHPLLQKSAVRKALISMISTRSIVQDVV
PYMQATTQFLPYSMQMDSDLAWEPVVVEQVLEQQGITESKPLQFTLTYDQQPPNVEIAQRLIRMWSQSDMIRVKAQPVAW
QQLLEKRAKRDFEVIRSGWCADYNEPSAFLNIFYSQAADNQAGYHHAEVDKLLEQTLLLQTETERKHLYSKITTQLQQDY
VVLPIFQYTTPIFIHPTVTGYHLDNPTGTMYSKDLYRKVSEHK

Specific function: Part of a binding-protein-dependent transport system [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=499, Percent_Identity=31.2625250501002, Blast_Score=257, Evalue=2e-69,
Organism=Escherichia coli, GI87081878, Length=529, Percent_Identity=29.4896030245747, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1789397, Length=491, Percent_Identity=30.142566191446, Blast_Score=195, Evalue=6e-51,
Organism=Escherichia coli, GI1787762, Length=453, Percent_Identity=23.3995584988962, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59664; Mature: 59664

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDASFSRYKTNMMTHLKSAVFSGLIFCLTACDQPTSVSSSLSAPPVSDMTPSREKLTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AVYHDLILNPHQMTNAEQAIFLQDLLEGLTAYDTAGHPVPAVAESWQSEDYKTWFFILRE
HHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEC
GAQWSNGDAVTAQDFVHSWQNLASSTSPLKTYLAFLNLANADAVLKGSMPVADLGIEAIE
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC
HRVLRIQLDKPTPALPAMLAHVALLPTYQKESAQFVSNGAYRLVNQQDDFIHLEKNPHYW
CEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCEEEEECCCCEE
AHQKVSFKFVDYQKISASQPVSNIDWVLAPQHTLTPLQYFPTLCTHYYEFNLKHPLLQKS
ECCEEEEEEECHHHHCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHH
AVRKALISMISTRSIVQDVVPYMQATTQFLPYSMQMDSDLAWEPVVVEQVLEQQGITESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCC
PLQFTLTYDQQPPNVEIAQRLIRMWSQSDMIRVKAQPVAWQQLLEKRAKRDFEVIRSGWC
CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
ADYNEPSAFLNIFYSQAADNQAGYHHAEVDKLLEQTLLLQTETERKHLYSKITTQLQQDY
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCE
VVLPIFQYTTPIFIHPTVTGYHLDNPTGTMYSKDLYRKVSEHK
EEEEEHHHCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSDASFSRYKTNMMTHLKSAVFSGLIFCLTACDQPTSVSSSLSAPPVSDMTPSREKLTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AVYHDLILNPHQMTNAEQAIFLQDLLEGLTAYDTAGHPVPAVAESWQSEDYKTWFFILRE
HHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEC
GAQWSNGDAVTAQDFVHSWQNLASSTSPLKTYLAFLNLANADAVLKGSMPVADLGIEAIE
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC
HRVLRIQLDKPTPALPAMLAHVALLPTYQKESAQFVSNGAYRLVNQQDDFIHLEKNPHYW
CEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCEEEEECCCCEE
AHQKVSFKFVDYQKISASQPVSNIDWVLAPQHTLTPLQYFPTLCTHYYEFNLKHPLLQKS
ECCEEEEEEECHHHHCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHH
AVRKALISMISTRSIVQDVVPYMQATTQFLPYSMQMDSDLAWEPVVVEQVLEQQGITESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCC
PLQFTLTYDQQPPNVEIAQRLIRMWSQSDMIRVKAQPVAWQQLLEKRAKRDFEVIRSGWC
CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
ADYNEPSAFLNIFYSQAADNQAGYHHAEVDKLLEQTLLLQTETERKHLYSKITTQLQQDY
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCE
VVLPIFQYTTPIFIHPTVTGYHLDNPTGTMYSKDLYRKVSEHK
EEEEEHHHCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]