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The map label for this gene is yciO [C]

Identifier: 15602527

GI number: 15602527

Start: 769689

End: 770312

Strand: Reverse

Name: yciO [C]

Synonym: PM0662

Alternate gene names: 15602527

Gene position: 770312-769689 (Counterclockwise)

Preceding gene: 15602528

Following gene: 15602526

Centisome position: 34.12

GC content: 40.06

Gene sequence:

>624_bases
ATGAGTCAATTTTTTTATATTCATCCAGAAAATCCACAAGTACGTTTAATTAATCAAGCGGTGGAGATTTTGCGTGCTGG
TGGTGTGATTGTTTATCCGACTGATTCTGGTTATGCACTGGGATGCATGATCGGTGATAAACATGCGATGGATCGCATTG
TACAGATCCGCCAATTACCTGAAGGGCATAATTTTACACTTGTCTGCAGTGACTTATCAGAATTATCTACCTATTCATTG
GTGAATAATATGGCGTACCGCTTGATTAAAAATAATACGCCAGGTCGTTATACTTTTATTTTAACGGCAACAAAAGAATT
ACCACGACGTTTAATGACGTCAAAACGTAAAACTATTGGGATTCGTGTACCTGACAATCAAATTGCATTAGCGTTATTAA
GCACCTTAGGGGAGCCGATTTTATCTTGTTCCTTGATGTTACCGGGTGAGGAAAATGTTACCCAGTCAGATCCTGAAGAG
ATTCGAGATCGTTTAGAAAAACAGGTGGATTTGATTATTCATGGTGGTTATCTCGGCGCAGAACCAACAACTGTGGTTGA
TTTAACAAACGATACCCCGATAATTATCCGCGAAGGGAGTGGGTCTACCGCGCCTTTTGTCTAA

Upstream 100 bases:

>100_bases
GTCCGTGTTGGATTTTTTCGTTTTTTCCGTTCAAATCGTTATAGGATTGACCTAACAGTGTGTATAATACCGCCCATATA
TTCATAAGGATATTGAGATT

Downstream 100 bases:

>100_bases
TATCATGTCGTAAAAAGACGCTTGTGAAAGCGACAAATTAGAGGAAATATGAAGTTTACCAAACCAAATTCTCGTCAAAA
TAAACCGCACGTTGAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSQFFYIHPENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLVCSDLSELSTYSL
VNNMAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGIRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEE
IRDRLEKQVDLIIHGGYLGAEPTTVVDLTNDTPIIIREGSGSTAPFV

Sequences:

>Translated_207_residues
MSQFFYIHPENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLVCSDLSELSTYSL
VNNMAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGIRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEE
IRDRLEKQVDLIIHGGYLGAEPTTVVDLTNDTPIIIREGSGSTAPFV
>Mature_206_residues
SQFFYIHPENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLPEGHNFTLVCSDLSELSTYSLV
NNMAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGIRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEEI
RDRLEKQVDLIIHGGYLGAEPTTVVDLTNDTPIIIREGSGSTAPFV

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=207, Percent_Identity=75.8454106280193, Blast_Score=333, Evalue=4e-93,
Organism=Escherichia coli, GI2367210, Length=142, Percent_Identity=28.169014084507, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 22957; Mature: 22826

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFFYIHPENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLP
CCCEEEEECCCCCEEHHHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHCCC
EGHNFTLVCSDLSELSTYSLVNNMAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIG
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHCCCCEEE
IRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEEIRDRLEKQVDLIIHGGYLGA
EEECCCHHHHHHHHHHCHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEECCEECC
EPTTVVDLTNDTPIIIREGSGSTAPFV
CCCEEEEECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SQFFYIHPENPQVRLINQAVEILRAGGVIVYPTDSGYALGCMIGDKHAMDRIVQIRQLP
CCEEEEECCCCCEEHHHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHCCC
EGHNFTLVCSDLSELSTYSLVNNMAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIG
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHCCCCEEE
IRVPDNQIALALLSTLGEPILSCSLMLPGEENVTQSDPEEIRDRLEKQVDLIIHGGYLGA
EEECCCHHHHHHHHHHCHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEECCEECC
EPTTVVDLTNDTPIIIREGSGSTAPFV
CCCEEEEECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]