| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yqjD [C]
Identifier: 15602477
GI number: 15602477
Start: 714398
End: 714709
Strand: Direct
Name: yqjD [C]
Synonym: PM0612
Alternate gene names: 15602477
Gene position: 714398-714709 (Clockwise)
Preceding gene: 15602476
Following gene: 15602478
Centisome position: 31.65
GC content: 33.01
Gene sequence:
>312_bases ATGAGTAAAGAATTCGATAAAAAACGTGATGAATTATTAAGTGAGATTCGTGAGATCTTAGATAACGCAGAAGAGCTATT CGATGAAAAATCTAAAGCCAGTGTGGATGAATTAAAAAAACTGAAATCGAATCTGGATTCACGTGTTTCTAAATTACAGA AACAATTTGGCGTATTAAAGGATGATGCTGTTGCTGGTACGAAAGAAGTGATTAAACAAACTGACGAGTTAGTCCAAGAT AATCCTTATAAAGCAATTGGGGTTGCTGGTGTTATTGGATTATTATTAGGCGTTTTAATCTCTAAGAAATAA
Upstream 100 bases:
>100_bases ACAAAAATTTGACATTTTAGGTTAAAAAATAATAAGATGAAGTGGTCTAGCCAGAATCCCCTCGTTAGATTTACCACATT TAGTAGGAGAATTTACAAGA
Downstream 100 bases:
>100_bases CGTTTTACAATTGTAAAAGGCTACATGGTGTAGCCTTTTCTTACAATTAGGACGATAAATGCAAATTTTACAGAAAATCA AAAACATCACCCTCACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSKEFDKKRDELLSEIREILDNAEELFDEKSKASVDELKKLKSNLDSRVSKLQKQFGVLKDDAVAGTKEVIKQTDELVQD NPYKAIGVAGVIGLLLGVLISKK
Sequences:
>Translated_103_residues MSKEFDKKRDELLSEIREILDNAEELFDEKSKASVDELKKLKSNLDSRVSKLQKQFGVLKDDAVAGTKEVIKQTDELVQD NPYKAIGVAGVIGLLLGVLISKK >Mature_102_residues SKEFDKKRDELLSEIREILDNAEELFDEKSKASVDELKKLKSNLDSRVSKLQKQFGVLKDDAVAGTKEVIKQTDELVQDN PYKAIGVAGVIGLLLGVLISKK
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789485, Length=103, Percent_Identity=29.126213592233, Blast_Score=59, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11490; Mature: 11359
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEFDKKRDELLSEIREILDNAEELFDEKSKASVDELKKLKSNLDSRVSKLQKQFGVLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DDAVAGTKEVIKQTDELVQDNPYKAIGVAGVIGLLLGVLISKK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKEFDKKRDELLSEIREILDNAEELFDEKSKASVDELKKLKSNLDSRVSKLQKQFGVLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DDAVAGTKEVIKQTDELVQDNPYKAIGVAGVIGLLLGVLISKK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA