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The map label for this gene is ycgN [C]

Identifier: 15602404

GI number: 15602404

Start: 615388

End: 615864

Strand: Direct

Name: ycgN [C]

Synonym: PM0539

Alternate gene names: 15602404

Gene position: 615388-615864 (Clockwise)

Preceding gene: 15602403

Following gene: 15602405

Centisome position: 27.26

GC content: 36.69

Gene sequence:

>477_bases
ATGATCTGTTTTAGAGAGTGTCACGAATTGATGAAGTCGTCAATTGAACCTGATTTTTGGAAACACAAAACCTTACTTGA
AATGACCGACGCAGAGTGGGAAGCACTCTGTGATGGTTGTGGTAAATGTTGTTATCGAAAATTCATTGAGGGGCATGGTA
AACGTAAGAAACTGTATTACACTCGCATTGCATGTAATCTTTTAGACTTAGAAACGGGAAGATGCACTAATTATGCAAAA
CGTTTTCAGTTAGAAACTGATTGTACGAAACTAACTAAGAAAAATTTACCCGATTTTCATTGGCTTCCCCCGACGTGTGC
TTATCGTTTATTAAATGAAAATAAACCGCTCTTTGACTGGCATCCGCTGATTTCTGGTGATCCTCATTCTGTAAAAAAAG
CCAATATTTTGATTAAACAGGGTATTCATGAAAAAGATGTCATTGATTGGTTTGAGTTTGTCGTTGATGGACATTAA

Upstream 100 bases:

>100_bases
TACGGTTTGTTCATAAAAAGAAAAGGACGAAGCACAAGCGCTCATACTGGAAAAGATTGATCTACGAAATAAGTGCGGTA
GAATATCGCACTTATTTTTT

Downstream 100 bases:

>100_bases
AACCTGTTTATTTCTATTCGCGATTATCGCCGGGAGAGTCAGGAGCTCAATAAGCAGACGAGCTAGAGATAGCGACTTAT
TAGAAAACCAGTAGATATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MICFRECHELMKSSIEPDFWKHKTLLEMTDAEWEALCDGCGKCCYRKFIEGHGKRKKLYYTRIACNLLDLETGRCTNYAK
RFQLETDCTKLTKKNLPDFHWLPPTCAYRLLNENKPLFDWHPLISGDPHSVKKANILIKQGIHEKDVIDWFEFVVDGH

Sequences:

>Translated_158_residues
MICFRECHELMKSSIEPDFWKHKTLLEMTDAEWEALCDGCGKCCYRKFIEGHGKRKKLYYTRIACNLLDLETGRCTNYAK
RFQLETDCTKLTKKNLPDFHWLPPTCAYRLLNENKPLFDWHPLISGDPHSVKKANILIKQGIHEKDVIDWFEFVVDGH
>Mature_158_residues
MICFRECHELMKSSIEPDFWKHKTLLEMTDAEWEALCDGCGKCCYRKFIEGHGKRKKLYYTRIACNLLDLETGRCTNYAK
RFQLETDCTKLTKKNLPDFHWLPPTCAYRLLNENKPLFDWHPLISGDPHSVKKANILIKQGIHEKDVIDWFEFVVDGH

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=139, Percent_Identity=47.4820143884892, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18653; Mature: 18653

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICFRECHELMKSSIEPDFWKHKTLLEMTDAEWEALCDGCGKCCYRKFIEGHGKRKKLYY
CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEH
TRIACNLLDLETGRCTNYAKRFQLETDCTKLTKKNLPDFHWLPPTCAYRLLNENKPLFDW
HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEC
HPLISGDPHSVKKANILIKQGIHEKDVIDWFEFVVDGH
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MICFRECHELMKSSIEPDFWKHKTLLEMTDAEWEALCDGCGKCCYRKFIEGHGKRKKLYY
CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEH
TRIACNLLDLETGRCTNYAKRFQLETDCTKLTKKNLPDFHWLPPTCAYRLLNENKPLFDW
HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEC
HPLISGDPHSVKKANILIKQGIHEKDVIDWFEFVVDGH
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]