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The map label for this gene is yaaJ [C]

Identifier: 15602394

GI number: 15602394

Start: 605796

End: 607274

Strand: Direct

Name: yaaJ [C]

Synonym: PM0529

Alternate gene names: 15602394

Gene position: 605796-607274 (Clockwise)

Preceding gene: 15602393

Following gene: 15602395

Centisome position: 26.83

GC content: 40.43

Gene sequence:

>1479_bases
TTGTTAATTTTGCTTTTTAACTCAGGAGGAATAATGAGCATATTTTCTACTTTCGAAACAATAGTAGAACAGGCTTTAAC
GTGGTTTGTTGAAAAAGTAGATGGTCCATTATGGGACATTACGATAGTGACATTATTAGGTGTTGGTTTATTTTTTACAA
TCACAACAGGGTTAGTGCAATTACGTTTATTACCACGCAGTTTACGTGAAATGTGGTCAGGTCGAAGTGCAGAAGGCAAT
TCATTAACGCCATTTCAAGCATTCACGACCGGATTAGCCAGTCGTGTTGGCGTAGGAAATATCGGTGGTGTCGCAACAGC
AATTGCGATTGGTGGTGAAGGTGCTGTGTTCTGGATGTGGATCACGGCGCTGATTGGCATGAGTAGTGCATTTGCTGAGT
CATCCTTAGCCCAATTATTTAAAGTCAAAGAACCTTGTGGTTTGTACCGTGGCGGTCCAGCCTATTACATTACCAAAGGA
TTAAAAGCACCGCTCTTGGGAGCAGCATTTGCAGTCAGTTTAATTTTTACATTTGGTTTTGCTTTTAATGCAGTACAAGC
GAATGCAATTGTCGAAGCAACCAATAATGCTTGGCATTGGAATGCACAATATGTTGGCTGGGTGTTAGTTGCAATTACAG
CATTCATTATTTTCGGTGGCGTAAAACGCATTGGCGCAGTGAGTGCGAAATTAGTCCCCATGATGGCGTTATTTTATCTG
ATTATTGCTGTGATTATTTTAGGCATGAATATTCATGCGATTCCGATGGTCATTTCACGGATTGTGTCGAGTGCTTTTGA
TTTCAGTGCTATGGCGGGTGGTATGTTTGGTGCCATTTTTTCTAAAGCCATGCTAATGGGGGTGAAACGTGGATTATTTT
CTAATGAAGCAGGGATGGGATCCGCGCCAAATTCCGCAGCCTCGGCAGATGTGAAACATCCTGCGAGTCAAGGCTTAATT
CAAATGCTTGGCGTCTTTGTCGATACGATTATTGTATGTACTTGTACTGCAGTCATCATTTTACTTTCGGATAACTATGG
CAATGAAACATTAAAAGGCATTTCTTTAACGCAGCACGCGTTACAATATCATGTCGGTGATTTTGGTTTACATTTCTTGG
CAGCCATTTTATTTTTGTTTGCGTATTCATCCATTATTGGTAACTATGCGTATGCGGAAAGCAATATCCGTTTTCTGCGT
AATAAGCCACTCTTTATTTTTATTTTCCGCTTGATGGTTCTCTTTTTTGTGTACTTTGGTGCCATTAATCATGCCAATAT
CGTGTGGAATTTTGCTGATACAGTCATGGCCATCATGGCGATGATTAACTTGGTGGCGATTGTATTATTATCACCTATCG
TTTGGTTAATTCTGAGAGATTATCAACAGCAAATAAAAGCGGGCGTTGAACCGGTATTTAAACTCGAACAACATCCTACT
TTGGCAAAGCGTGGTGTCGATAACGATATTTGGTCTTAA

Upstream 100 bases:

>100_bases
ATAGCATTTTATTAGAAATTATCTAATTAATTTGTCTTTTTTTAATGAAAAGATAATAAAAATCCCCATTTTTCGTAAAA
AAATAATAGAATACGGCTCT

Downstream 100 bases:

>100_bases
TGACTTATACGTAAAATTCCTTTATGATTGACCGCACTTTTCAGCAGATGAATTTGAATGAAATTTGTGGTCAATAAATC
AAATGAGTGGGAATGAAGTA

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MLILLFNSGGIMSIFSTFETIVEQALTWFVEKVDGPLWDITIVTLLGVGLFFTITTGLVQLRLLPRSLREMWSGRSAEGN
SLTPFQAFTTGLASRVGVGNIGGVATAIAIGGEGAVFWMWITALIGMSSAFAESSLAQLFKVKEPCGLYRGGPAYYITKG
LKAPLLGAAFAVSLIFTFGFAFNAVQANAIVEATNNAWHWNAQYVGWVLVAITAFIIFGGVKRIGAVSAKLVPMMALFYL
IIAVIILGMNIHAIPMVISRIVSSAFDFSAMAGGMFGAIFSKAMLMGVKRGLFSNEAGMGSAPNSAASADVKHPASQGLI
QMLGVFVDTIIVCTCTAVIILLSDNYGNETLKGISLTQHALQYHVGDFGLHFLAAILFLFAYSSIIGNYAYAESNIRFLR
NKPLFIFIFRLMVLFFVYFGAINHANIVWNFADTVMAIMAMINLVAIVLLSPIVWLILRDYQQQIKAGVEPVFKLEQHPT
LAKRGVDNDIWS

Sequences:

>Translated_492_residues
MLILLFNSGGIMSIFSTFETIVEQALTWFVEKVDGPLWDITIVTLLGVGLFFTITTGLVQLRLLPRSLREMWSGRSAEGN
SLTPFQAFTTGLASRVGVGNIGGVATAIAIGGEGAVFWMWITALIGMSSAFAESSLAQLFKVKEPCGLYRGGPAYYITKG
LKAPLLGAAFAVSLIFTFGFAFNAVQANAIVEATNNAWHWNAQYVGWVLVAITAFIIFGGVKRIGAVSAKLVPMMALFYL
IIAVIILGMNIHAIPMVISRIVSSAFDFSAMAGGMFGAIFSKAMLMGVKRGLFSNEAGMGSAPNSAASADVKHPASQGLI
QMLGVFVDTIIVCTCTAVIILLSDNYGNETLKGISLTQHALQYHVGDFGLHFLAAILFLFAYSSIIGNYAYAESNIRFLR
NKPLFIFIFRLMVLFFVYFGAINHANIVWNFADTVMAIMAMINLVAIVLLSPIVWLILRDYQQQIKAGVEPVFKLEQHPT
LAKRGVDNDIWS
>Mature_492_residues
MLILLFNSGGIMSIFSTFETIVEQALTWFVEKVDGPLWDITIVTLLGVGLFFTITTGLVQLRLLPRSLREMWSGRSAEGN
SLTPFQAFTTGLASRVGVGNIGGVATAIAIGGEGAVFWMWITALIGMSSAFAESSLAQLFKVKEPCGLYRGGPAYYITKG
LKAPLLGAAFAVSLIFTFGFAFNAVQANAIVEATNNAWHWNAQYVGWVLVAITAFIIFGGVKRIGAVSAKLVPMMALFYL
IIAVIILGMNIHAIPMVISRIVSSAFDFSAMAGGMFGAIFSKAMLMGVKRGLFSNEAGMGSAPNSAASADVKHPASQGLI
QMLGVFVDTIIVCTCTAVIILLSDNYGNETLKGISLTQHALQYHVGDFGLHFLAAILFLFAYSSIIGNYAYAESNIRFLR
NKPLFIFIFRLMVLFFVYFGAINHANIVWNFADTVMAIMAMINLVAIVLLSPIVWLILRDYQQQIKAGVEPVFKLEQHPT
LAKRGVDNDIWS

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=469, Percent_Identity=40.724946695096, Blast_Score=328, Evalue=6e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 53389; Mature: 53389

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILLFNSGGIMSIFSTFETIVEQALTWFVEKVDGPLWDITIVTLLGVGLFFTITTGLVQ
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLLPRSLREMWSGRSAEGNSLTPFQAFTTGLASRVGVGNIGGVATAIAIGGEGAVFWMW
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCHHHHHH
ITALIGMSSAFAESSLAQLFKVKEPCGLYRGGPAYYITKGLKAPLLGAAFAVSLIFTFGF
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHH
AFNAVQANAIVEATNNAWHWNAQYVGWVLVAITAFIIFGGVKRIGAVSAKLVPMMALFYL
HHHHHHHCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAVIILGMNIHAIPMVISRIVSSAFDFSAMAGGMFGAIFSKAMLMGVKRGLFSNEAGMG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SAPNSAASADVKHPASQGLIQMLGVFVDTIIVCTCTAVIILLSDNYGNETLKGISLTQHA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
LQYHVGDFGLHFLAAILFLFAYSSIIGNYAYAESNIRFLRNKPLFIFIFRLMVLFFVYFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHC
AINHANIVWNFADTVMAIMAMINLVAIVLLSPIVWLILRDYQQQIKAGVEPVFKLEQHPT
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
LAKRGVDNDIWS
HHHCCCCCCCCC
>Mature Secondary Structure
MLILLFNSGGIMSIFSTFETIVEQALTWFVEKVDGPLWDITIVTLLGVGLFFTITTGLVQ
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLLPRSLREMWSGRSAEGNSLTPFQAFTTGLASRVGVGNIGGVATAIAIGGEGAVFWMW
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCHHHHHH
ITALIGMSSAFAESSLAQLFKVKEPCGLYRGGPAYYITKGLKAPLLGAAFAVSLIFTFGF
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHH
AFNAVQANAIVEATNNAWHWNAQYVGWVLVAITAFIIFGGVKRIGAVSAKLVPMMALFYL
HHHHHHHCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAVIILGMNIHAIPMVISRIVSSAFDFSAMAGGMFGAIFSKAMLMGVKRGLFSNEAGMG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SAPNSAASADVKHPASQGLIQMLGVFVDTIIVCTCTAVIILLSDNYGNETLKGISLTQHA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
LQYHVGDFGLHFLAAILFLFAYSSIIGNYAYAESNIRFLRNKPLFIFIFRLMVLFFVYFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHC
AINHANIVWNFADTVMAIMAMINLVAIVLLSPIVWLILRDYQQQIKAGVEPVFKLEQHPT
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
LAKRGVDNDIWS
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]