| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602375
Identifier: 15602375
GI number: 15602375
Start: 584099
End: 585286
Strand: Direct
Name: 15602375
Synonym: PM0510
Alternate gene names: NA
Gene position: 584099-585286 (Clockwise)
Preceding gene: 15602374
Following gene: 15602376
Centisome position: 25.87
GC content: 39.06
Gene sequence:
>1188_bases ATGTCAGCATTATTGAATTTCTTTTATTTGTACGATCCTTGGTTAGCGCATGTTTTTCGCATGGCCTTTTTTAGCGGTGT GATTGCCTGTGTGGTGTTAGCCTATCGGGTATATCAAAAACAGTTACCACAAGGTATTTTGCTTCCGCTAGACAGTATTG GCGTGATTCTTGCGTTGATTTTATTGAGCCTCATACCGACGCTGATAAACGGGACAAACGAGTTTGCTGTCGCCAAAATG TATGTCAAAACTTTGTTACTGTTTTTGTTTGGAGTGGCGATTTATCATGTATTTTATTGCCATCATCAAGGCAAAACACA GTTGATACGTGATTTAAAAATCGGAATTGTGGTACAAGCCGTCGTGGGTATCGTTGCACTTATGGGCGTGGCTTTTATGA TTGATTTTGCCTTATCAACGAATACGCTGTTACCTCGCTTTTATCAGTCAGAGCAAGAATACCGTTTATACAATCTCACT TCTTCCGCGTTTTTCCAGCTCAGTATTTTCTATCTGATGTTGTTACACTTTTTATTGGCTTACAATGCAAAAACGAATCA AATTTCGCCAATATTTGTATTTTTATTGTTGTTTATTGGCTTAATTTCAGGCAGAACCTTCTTTGTGCTCTCTGTGGTCA GTGTGTTGATTTATTTTAAATGGCGTTATTTGCCTGCGTTGCTTCTATTTGCTGGCTTGGTGTTGTTCTTCGCCCTGAAT TTCCCGCAACATAAATATGTCGCACATGCGTTAGAACCGGTGATTAATTTACTGTCACATCAAGATGTAAGTAAGATCAG TTCGTCAAGTGAGAATTTGATTAAAAATCAGTTATTTATCCCAACGTTTAAACAATTCTTGATGGGGGATGGTTATTATT ACACCGCCGAAGGGAAATATTATGGTGCTACCGATTCAGGGTTTCTTCGCCAAGTTTTGTATGGTGGGCTAGGTTATTTA TTGGTGTGTTTTTTATTCACCTTCTATTTTGTCAAACGGGTAGCGGATAATTGGTTTGACGGCAGTTGGCGCTTTATGCT GTCCACTGTATTTATTTTAAGTGTATTACACGTCAAAGCTGACACCTATGCCTTTCCCGGTATTATGCTAGTTTTATTGA TGTTCTTATCGTTATTTGGCACGACGGGAAAATACCGTATTTTCTGTCAAGCGCGAGAGGGGGCATAA
Upstream 100 bases:
>100_bases CTCGGTTTCACATCATTTATGGCAGAAATGGCTGAAATATCCGTTGAAAAAATGGTTAGCAATTCAACGTAATTTTCAGA TTAAAGGTTAGGTACAGGGT
Downstream 100 bases:
>100_bases TGTTTAGTATTATTGTGCCGTCTTACAATCGACAAGCGGAAATCCCTGCGTTGTTGGAAAGTTTACATCAGCAAACCGTA ACGCATTTTGAAGTAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSALLNFFYLYDPWLAHVFRMAFFSGVIACVVLAYRVYQKQLPQGILLPLDSIGVILALILLSLIPTLINGTNEFAVAKM YVKTLLLFLFGVAIYHVFYCHHQGKTQLIRDLKIGIVVQAVVGIVALMGVAFMIDFALSTNTLLPRFYQSEQEYRLYNLT SSAFFQLSIFYLMLLHFLLAYNAKTNQISPIFVFLLLFIGLISGRTFFVLSVVSVLIYFKWRYLPALLLFAGLVLFFALN FPQHKYVAHALEPVINLLSHQDVSKISSSSENLIKNQLFIPTFKQFLMGDGYYYTAEGKYYGATDSGFLRQVLYGGLGYL LVCFLFTFYFVKRVADNWFDGSWRFMLSTVFILSVLHVKADTYAFPGIMLVLLMFLSLFGTTGKYRIFCQAREGA
Sequences:
>Translated_395_residues MSALLNFFYLYDPWLAHVFRMAFFSGVIACVVLAYRVYQKQLPQGILLPLDSIGVILALILLSLIPTLINGTNEFAVAKM YVKTLLLFLFGVAIYHVFYCHHQGKTQLIRDLKIGIVVQAVVGIVALMGVAFMIDFALSTNTLLPRFYQSEQEYRLYNLT SSAFFQLSIFYLMLLHFLLAYNAKTNQISPIFVFLLLFIGLISGRTFFVLSVVSVLIYFKWRYLPALLLFAGLVLFFALN FPQHKYVAHALEPVINLLSHQDVSKISSSSENLIKNQLFIPTFKQFLMGDGYYYTAEGKYYGATDSGFLRQVLYGGLGYL LVCFLFTFYFVKRVADNWFDGSWRFMLSTVFILSVLHVKADTYAFPGIMLVLLMFLSLFGTTGKYRIFCQAREGA >Mature_394_residues SALLNFFYLYDPWLAHVFRMAFFSGVIACVVLAYRVYQKQLPQGILLPLDSIGVILALILLSLIPTLINGTNEFAVAKMY VKTLLLFLFGVAIYHVFYCHHQGKTQLIRDLKIGIVVQAVVGIVALMGVAFMIDFALSTNTLLPRFYQSEQEYRLYNLTS SAFFQLSIFYLMLLHFLLAYNAKTNQISPIFVFLLLFIGLISGRTFFVLSVVSVLIYFKWRYLPALLLFAGLVLFFALNF PQHKYVAHALEPVINLLSHQDVSKISSSSENLIKNQLFIPTFKQFLMGDGYYYTAEGKYYGATDSGFLRQVLYGGLGYLL VCFLFTFYFVKRVADNWFDGSWRFMLSTVFILSVLHVKADTYAFPGIMLVLLMFLSLFGTTGKYRIFCQAREGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45082; Mature: 44951
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALLNFFYLYDPWLAHVFRMAFFSGVIACVVLAYRVYQKQLPQGILLPLDSIGVILALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LLSLIPTLINGTNEFAVAKMYVKTLLLFLFGVAIYHVFYCHHQGKTQLIRDLKIGIVVQA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VVGIVALMGVAFMIDFALSTNTLLPRFYQSEQEYRLYNLTSSAFFQLSIFYLMLLHFLLA HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH YNAKTNQISPIFVFLLLFIGLISGRTFFVLSVVSVLIYFKWRYLPALLLFAGLVLFFALN HCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FPQHKYVAHALEPVINLLSHQDVSKISSSSENLIKNQLFIPTFKQFLMGDGYYYTAEGKY CCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCEEEEECCEE YGATDSGFLRQVLYGGLGYLLVCFLFTFYFVKRVADNWFDGSWRFMLSTVFILSVLHVKA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DTYAFPGIMLVLLMFLSLFGTTGKYRIFCQAREGA CHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC >Mature Secondary Structure SALLNFFYLYDPWLAHVFRMAFFSGVIACVVLAYRVYQKQLPQGILLPLDSIGVILALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LLSLIPTLINGTNEFAVAKMYVKTLLLFLFGVAIYHVFYCHHQGKTQLIRDLKIGIVVQA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VVGIVALMGVAFMIDFALSTNTLLPRFYQSEQEYRLYNLTSSAFFQLSIFYLMLLHFLLA HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH YNAKTNQISPIFVFLLLFIGLISGRTFFVLSVVSVLIYFKWRYLPALLLFAGLVLFFALN HCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FPQHKYVAHALEPVINLLSHQDVSKISSSSENLIKNQLFIPTFKQFLMGDGYYYTAEGKY CCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCEEEEECCEE YGATDSGFLRQVLYGGLGYLLVCFLFTFYFVKRVADNWFDGSWRFMLSTVFILSVLHVKA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DTYAFPGIMLVLLMFLSLFGTTGKYRIFCQAREGA CHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA