| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602354
Identifier: 15602354
GI number: 15602354
Start: 570256
End: 570669
Strand: Direct
Name: 15602354
Synonym: PM0489
Alternate gene names: NA
Gene position: 570256-570669 (Clockwise)
Preceding gene: 15602353
Following gene: 15602355
Centisome position: 25.26
GC content: 28.99
Gene sequence:
>414_bases ATGATATTATCTTTTGAATATATTAATTCTTTTAATCGGTTAATACCTATTTGCGATAGCTGTTCAAACTATCCTATTGG TTCTTATGTAGCAACTTATATTAGGCTATTTGGAAAAAATGAATTCGAAGAAAAAGGTATTTATGATGATATAGTTAATA TATCGATAGAAAATGAATTTGTTGGTTTTGATGGAATTGATGCATTTATTGAAGGTGATAAAGTTAGAATTGGCTTTTAT CTTTATGGAAAAGGAGATGAGCCCGAAGATTATGATCCTGAGGAATCAGAATTTGAGATTATTGATAGAAAAGAGTTAAT TTATATTTTGAAACGATGGAAAGTATTTATACATAAACCCATAACCGACCCTCATTACCAAGAAATTATTGACACCAAGG AGGCGTATTTATGA
Upstream 100 bases:
>100_bases GATAACTAAATCAGGTGTTAAAGTACAATGGTATAGAAGTGAAAAAGGTGAGATAACCAGTGTTCATCCAATCTTAGAAT AAAATAATAAGGATATACTT
Downstream 100 bases:
>100_bases CCGTGATTGTGGGTGGACATTCCACCTTAGGCAATATTCGGGTGGACCGAGTATTACAAACCTATAAAAATGGCGTGTAT ATTGCACAAATTTCCGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MILSFEYINSFNRLIPICDSCSNYPIGSYVATYIRLFGKNEFEEKGIYDDIVNISIENEFVGFDGIDAFIEGDKVRIGFY LYGKGDEPEDYDPEESEFEIIDRKELIYILKRWKVFIHKPITDPHYQEIIDTKEAYL
Sequences:
>Translated_137_residues MILSFEYINSFNRLIPICDSCSNYPIGSYVATYIRLFGKNEFEEKGIYDDIVNISIENEFVGFDGIDAFIEGDKVRIGFY LYGKGDEPEDYDPEESEFEIIDRKELIYILKRWKVFIHKPITDPHYQEIIDTKEAYL >Mature_137_residues MILSFEYINSFNRLIPICDSCSNYPIGSYVATYIRLFGKNEFEEKGIYDDIVNISIENEFVGFDGIDAFIEGDKVRIGFY LYGKGDEPEDYDPEESEFEIIDRKELIYILKRWKVFIHKPITDPHYQEIIDTKEAYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0275 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y489_PASMU (Q9CNE3)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245426.1 - GeneID: 1243836 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0489 - NMPDR: fig|272843.1.peg.489 - HOGENOM: HBG145450 - ProtClustDB: CLSK304422 - BioCyc: PMUL272843:PM0489-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16163; Mature: 16163
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSFEYINSFNRLIPICDSCSNYPIGSYVATYIRLFGKNEFEEKGIYDDIVNISIENEF CEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEEECCCC VGFDGIDAFIEGDKVRIGFYLYGKGDEPEDYDPEESEFEIIDRKELIYILKRWKVFIHKP CCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEECC ITDPHYQEIIDTKEAYL CCCHHHHHHHHHHHHCC >Mature Secondary Structure MILSFEYINSFNRLIPICDSCSNYPIGSYVATYIRLFGKNEFEEKGIYDDIVNISIENEF CEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEEECCCC VGFDGIDAFIEGDKVRIGFYLYGKGDEPEDYDPEESEFEIIDRKELIYILKRWKVFIHKP CCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEECC ITDPHYQEIIDTKEAYL CCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100