| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yfeX [H]
Identifier: 15602320
GI number: 15602320
Start: 529457
End: 530347
Strand: Direct
Name: yfeX [H]
Synonym: PM0455
Alternate gene names: 15602320
Gene position: 529457-530347 (Clockwise)
Preceding gene: 161723315
Following gene: 15602324
Centisome position: 23.45
GC content: 41.53
Gene sequence:
>891_bases ATGACAGCGCAAAGTGGCGTATTATTAGAGCATTGCAAAGCTGCAATTTATTTAGAAGCAAACATCACGGATCTGACGGT GATTCCTGAAGCAAGTCGTCAATTCTGTGACAAATTAGCACAATTACAACAAACCTATCCTGATGCTAGACTCGGCGCGG TTGTTGCCTTTGGCGATAGGGTGTGGAAACAATTAGCAGGAGAGAACAGTGCAAAAGAGCTCAAACCTTTTGTGACATTA GGTAAAGGTGATGCCTCCGCACCTGCCACCCAATGGGATCTGTTGATTCATATTCAATCTTTACGTCCTGATGTGAATTT TTCTGTCGCCTTAGCCGCGATGAACTGCTTTGGTAAAGCGATTCAGGTTGAGCAAGAAATTCATGGTTTTCGCTGGGTAG AAGAACGTGATTTTACTGGTTTTATTGATGGTACAGAAAATCCACAAGCAGCAAAACGCGCAGAAGTCGCACTCATTGCA CAAGGTGACGATACGGATGGAAGTTATGTCTTTACACAACGCTATGAGCATAATTTAACCAAATGGGAAAAGCTTACTAC TGCGAAGCAGGAAATGGTAATTGGGCGGACTAAGCCGGACAGTATTGAGTTAGAAAATAAAGTGGATACCTCACATGTAG GGCGAACTGATCTAAAAGAAAATGGCGTGGGATTAAAAATTTTACGTCATAGTTTACCTTATGGTAAAGCCAGTGAGAAA CACGGTTTATTCTTTGTTGCTTACTGTGCAACCCTGTATAACATTGAGCAACAGTTACTCAATATGTTTGGTGAAAAAGA CGGTAAAACCGATCGTTTACTAGGCTTTACTAAAGCAGTAACCGGGAGCTATTATTTTGCGCCGTCGTTAGAGAAATTAA AAACTCTCTAA
Upstream 100 bases:
>100_bases TTAATCTCGCTTTCTGGTCTTTTTGTGAACTTTGTTTGGTGAAAAGATCAGAAAGACTTATAATCTGTACTGCTTTTTGA TTAATAAGAGAGAGAACAAA
Downstream 100 bases:
>100_bases TCTTCATATTCACTTAGAAAAGTGCGGTCAAAAAAGCAAAAAAATTGACCGCACTTTTTGTTTATGCTGTTTGCTCAGTT AGCAATGGCATCTTCTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTAQSGVLLEHCKAAIYLEANITDLTVIPEASRQFCDKLAQLQQTYPDARLGAVVAFGDRVWKQLAGENSAKELKPFVTL GKGDASAPATQWDLLIHIQSLRPDVNFSVALAAMNCFGKAIQVEQEIHGFRWVEERDFTGFIDGTENPQAAKRAEVALIA QGDDTDGSYVFTQRYEHNLTKWEKLTTAKQEMVIGRTKPDSIELENKVDTSHVGRTDLKENGVGLKILRHSLPYGKASEK HGLFFVAYCATLYNIEQQLLNMFGEKDGKTDRLLGFTKAVTGSYYFAPSLEKLKTL
Sequences:
>Translated_296_residues MTAQSGVLLEHCKAAIYLEANITDLTVIPEASRQFCDKLAQLQQTYPDARLGAVVAFGDRVWKQLAGENSAKELKPFVTL GKGDASAPATQWDLLIHIQSLRPDVNFSVALAAMNCFGKAIQVEQEIHGFRWVEERDFTGFIDGTENPQAAKRAEVALIA QGDDTDGSYVFTQRYEHNLTKWEKLTTAKQEMVIGRTKPDSIELENKVDTSHVGRTDLKENGVGLKILRHSLPYGKASEK HGLFFVAYCATLYNIEQQLLNMFGEKDGKTDRLLGFTKAVTGSYYFAPSLEKLKTL >Mature_295_residues TAQSGVLLEHCKAAIYLEANITDLTVIPEASRQFCDKLAQLQQTYPDARLGAVVAFGDRVWKQLAGENSAKELKPFVTLG KGDASAPATQWDLLIHIQSLRPDVNFSVALAAMNCFGKAIQVEQEIHGFRWVEERDFTGFIDGTENPQAAKRAEVALIAQ GDDTDGSYVFTQRYEHNLTKWEKLTTAKQEMVIGRTKPDSIELENKVDTSHVGRTDLKENGVGLKILRHSLPYGKASEKH GLFFVAYCATLYNIEQQLLNMFGEKDGKTDRLLGFTKAVTGSYYFAPSLEKLKTL
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=297, Percent_Identity=59.5959595959596, Blast_Score=353, Evalue=6e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 32952; Mature: 32821
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQSGVLLEHCKAAIYLEANITDLTVIPEASRQFCDKLAQLQQTYPDARLGAVVAFGDR CCCCCCHHHHHCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHEEHHHHH VWKQLAGENSAKELKPFVTLGKGDASAPATQWDLLIHIQSLRPDVNFSVALAAMNCFGKA HHHHHHCCCCHHHCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH IQVEQEIHGFRWVEERDFTGFIDGTENPQAAKRAEVALIAQGDDTDGSYVFTQRYEHNLT HHHHHHHCCCEEEECCCCEEEECCCCCCCHHHHCEEEEEECCCCCCCCEEEEEHHHCCHH KWEKLTTAKQEMVIGRTKPDSIELENKVDTSHVGRTDLKENGVGLKILRHSLPYGKASEK HHHHHHHHHHHHEEECCCCCCEEECCCCCCHHCCCCCHHCCCCCCEEHHHCCCCCCCCCC HGLFFVAYCATLYNIEQQLLNMFGEKDGKTDRLLGFTKAVTGSYYFAPSLEKLKTL CCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHCC >Mature Secondary Structure TAQSGVLLEHCKAAIYLEANITDLTVIPEASRQFCDKLAQLQQTYPDARLGAVVAFGDR CCCCCHHHHHCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHEEHHHHH VWKQLAGENSAKELKPFVTLGKGDASAPATQWDLLIHIQSLRPDVNFSVALAAMNCFGKA HHHHHHCCCCHHHCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH IQVEQEIHGFRWVEERDFTGFIDGTENPQAAKRAEVALIAQGDDTDGSYVFTQRYEHNLT HHHHHHHCCCEEEECCCCEEEECCCCCCCHHHHCEEEEEECCCCCCCCEEEEEHHHCCHH KWEKLTTAKQEMVIGRTKPDSIELENKVDTSHVGRTDLKENGVGLKILRHSLPYGKASEK HHHHHHHHHHHHEEECCCCCCEEECCCCCCHHCCCCCHHCCCCCCEEHHHCCCCCCCCCC HGLFFVAYCATLYNIEQQLLNMFGEKDGKTDRLLGFTKAVTGSYYFAPSLEKLKTL CCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]