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The map label for this gene is 15602282

Identifier: 15602282

GI number: 15602282

Start: 490186

End: 490836

Strand: Reverse

Name: 15602282

Synonym: PM0417

Alternate gene names: NA

Gene position: 490836-490186 (Counterclockwise)

Preceding gene: 15602284

Following gene: 15602279

Centisome position: 21.74

GC content: 40.4

Gene sequence:

>651_bases
ATGGAAAAAAACTTATATTTACCAGGATCAGATAAAGGTATTGTCAAAAAAGCCGCCCGAGAAGGTTGGCAAAAACGCCA
AAGACAAGGCGTGAAAGGCAAAACGTTTGAATATCACTATACGTCATTCCCTATTGCGGTCCAGCAACAACTTGGATTAT
ATCAAGCAGAACAGCCTCATTCTCAAGTGAATGAACCTCGTCGTCACTATACGACAGAAGTCAGTTCTATTGAAAATACA
CAAACAGAAGATCACATTCCGATCCCCTTTTACGCCTGTTTTAGTGCCTTCACATCTTCTGCAAAAGCAAACCAACACAT
TACGTTAATGAAAGATTGGTTAACAGGAAGAGGCATAACAGCAGATAAACTCGTTTTTGTCAGCGCTACCGGTGACAGCA
TGCTACCAACCATTCATCATGGTGATTTACTTCTGATTAATCGTGAAGTGAACAGTGCAAAAGAGGAAGGCATCTATGTG
ATACGTTCAGGTAAACAAGTCTGGATTAAGCGTATTCAAGGGCTTCCCAATGGCATTCGCTTAATGAGTGACAATAAGAC
ACTTTATCCGCCGATTGATCTCTCCTTTGAGCAATATCATGCCCTTGAGATTATCGGCAAAGTGATTTTTATTGGTCATC
ACTTAATTTAG

Upstream 100 bases:

>100_bases
TAAATCAATAAGTTAAACACTCACAAAAGTAAAACACATCGAGTTCCTTAGAAGGTTTTTTATGCAGAACTATCAAGAGT
GGTTTTCAATAAAAGAACTC

Downstream 100 bases:

>100_bases
TAAGGCTGTAGAAATCATACGACATGGTGCACTCACACACAAAAAAAGTGCGGTCATTTTGACCGCACTTTTTGTTCTTT
CGCTTAACGCCATTGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEKNLYLPGSDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNEPRRHYTTEVSSIENT
QTEDHIPIPFYACFSAFTSSAKANQHITLMKDWLTGRGITADKLVFVSATGDSMLPTIHHGDLLLINREVNSAKEEGIYV
IRSGKQVWIKRIQGLPNGIRLMSDNKTLYPPIDLSFEQYHALEIIGKVIFIGHHLI

Sequences:

>Translated_216_residues
MEKNLYLPGSDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNEPRRHYTTEVSSIENT
QTEDHIPIPFYACFSAFTSSAKANQHITLMKDWLTGRGITADKLVFVSATGDSMLPTIHHGDLLLINREVNSAKEEGIYV
IRSGKQVWIKRIQGLPNGIRLMSDNKTLYPPIDLSFEQYHALEIIGKVIFIGHHLI
>Mature_216_residues
MEKNLYLPGSDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNEPRRHYTTEVSSIENT
QTEDHIPIPFYACFSAFTSSAKANQHITLMKDWLTGRGITADKLVFVSATGDSMLPTIHHGDLLLINREVNSAKEEGIYV
IRSGKQVWIKRIQGLPNGIRLMSDNKTLYPPIDLSFEQYHALEIIGKVIFIGHHLI

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 24560; Mature: 24560

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNLYLPGSDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCH
SQVNEPRRHYTTEVSSIENTQTEDHIPIPFYACFSAFTSSAKANQHITLMKDWLTGRGIT
HHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCC
ADKLVFVSATGDSMLPTIHHGDLLLINREVNSAKEEGIYVIRSGKQVWIKRIQGLPNGIR
CCEEEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEE
LMSDNKTLYPPIDLSFEQYHALEIIGKVIFIGHHLI
EEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKNLYLPGSDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCH
SQVNEPRRHYTTEVSSIENTQTEDHIPIPFYACFSAFTSSAKANQHITLMKDWLTGRGIT
HHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCC
ADKLVFVSATGDSMLPTIHHGDLLLINREVNSAKEEGIYVIRSGKQVWIKRIQGLPNGIR
CCEEEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEE
LMSDNKTLYPPIDLSFEQYHALEIIGKVIFIGHHLI
EEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]