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The map label for this gene is yccA [C]

Identifier: 15602267

GI number: 15602267

Start: 469784

End: 470446

Strand: Reverse

Name: yccA [C]

Synonym: PM0402

Alternate gene names: 15602267

Gene position: 470446-469784 (Counterclockwise)

Preceding gene: 15602268

Following gene: 15602266

Centisome position: 20.84

GC content: 38.46

Gene sequence:

>663_bases
ATGGAATCTCGCATTGTTCTAGATAGCAGAGAAACATCTCTACTTAACACCCACAAAGTGTTACGCAATACTTATTTCTT
ATTAGGTTTAACCCTCGCTTTTTCAGCAGTGGTCGCTTACATCTCAATGAGCCTAAACTTACCACGCCCAGGTCTCATTT
TGATGCTAGCAGGCTTCTACGGTTTATTATTTTTAACTTATAAATTATCCAACAGTGGTTTAGGGATTCTTTCTACGTTC
GCATTTACCGGCTTTTTAGGCTATACATTAGGACCAATTTTAAATGTCTATGTCAGTCACGGTGCAGGTGATATTGTCGT
CTTAGCCCTTGCCGGCACAGCGGCTGTGTTCTTTGCTTGTTCAGCTTATGTGTTAACGACAAAGAAAGACATGTCTTTCC
TTTCTGGTACCATTTTCGCTTTATTCATTGTCCTTTTACTCGGTATGGTTGCCAGTTTCTTCTTCCAATCACCAATGCTT
TACATTGCTATCAGTGGTTTATTCGTCGTGTTCTCTACTTTGGGTATTCTCTACGAAACCAGCAATATTATTCATGGCGG
AGAAACCAACTATATTCGTGCAACAGTCAGTATTTTCGTATCACTGTATAACTTATTTATTAGCTTACTCAATATCTTCT
CGATTTTATCCAATGAAGATTAA

Upstream 100 bases:

>100_bases
TACAAATTTGTTACGTTTTAACATTGACTTTTCAATGATGAACCAGTACTTTATCGCCATCGTTTTATCTTTATTCCATT
GCTAAAGGAGCCTTCATACC

Downstream 100 bases:

>100_bases
TCTAAAATACGAATCCATTTAATAGATAAATTAAGCGCCCCATTTTTGGGGCGTTTTGCTATAATGACGCCGTAAAAATA
AGGTCAATTGAGAAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MESRIVLDSRETSLLNTHKVLRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLAGFYGLLFLTYKLSNSGLGILSTF
AFTGFLGYTLGPILNVYVSHGAGDIVVLALAGTAAVFFACSAYVLTTKKDMSFLSGTIFALFIVLLLGMVASFFFQSPML
YIAISGLFVVFSTLGILYETSNIIHGGETNYIRATVSIFVSLYNLFISLLNIFSILSNED

Sequences:

>Translated_220_residues
MESRIVLDSRETSLLNTHKVLRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLAGFYGLLFLTYKLSNSGLGILSTF
AFTGFLGYTLGPILNVYVSHGAGDIVVLALAGTAAVFFACSAYVLTTKKDMSFLSGTIFALFIVLLLGMVASFFFQSPML
YIAISGLFVVFSTLGILYETSNIIHGGETNYIRATVSIFVSLYNLFISLLNIFSILSNED
>Mature_220_residues
MESRIVLDSRETSLLNTHKVLRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLAGFYGLLFLTYKLSNSGLGILSTF
AFTGFLGYTLGPILNVYVSHGAGDIVVLALAGTAAVFFACSAYVLTTKKDMSFLSGTIFALFIVLLLGMVASFFFQSPML
YIAISGLFVVFSTLGILYETSNIIHGGETNYIRATVSIFVSLYNLFISLLNIFSILSNED

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family

Homologues:

Organism=Escherichia coli, GI1787205, Length=218, Percent_Identity=65.1376146788991, Blast_Score=274, Evalue=4e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y402_PASMU (Q9CNM5)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245339.1
- ProteinModelPortal:   Q9CNM5
- GeneID:   1243749
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0402
- NMPDR:   fig|272843.1.peg.402
- HOGENOM:   HBG595196
- OMA:   TYALLSM
- ProtClustDB:   CLSK870081
- BioCyc:   PMUL272843:PM0402-MONOMER
- InterPro:   IPR006214
- PANTHER:   PTHR23291

Pfam domain/function: PF01027 UPF0005

EC number: NA

Molecular weight: Translated: 23937; Mature: 23937

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcadabac)-; HASH(0xce923d4)-; HASH(0xcde45b8)-; HASH(0xb0c0aa8)-; HASH(0xc375848)-; HASH(0xc76cae4)-; HASH(0xc26ab18)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRIVLDSRETSLLNTHKVLRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLAGFY
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GLLFLTYKLSNSGLGILSTFAFTGFLGYTLGPILNVYVSHGAGDIVVLALAGTAAVFFAC
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
SAYVLTTKKDMSFLSGTIFALFIVLLLGMVASFFFQSPMLYIAISGLFVVFSTLGILYET
HHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
SNIIHGGETNYIRATVSIFVSLYNLFISLLNIFSILSNED
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MESRIVLDSRETSLLNTHKVLRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLAGFY
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GLLFLTYKLSNSGLGILSTFAFTGFLGYTLGPILNVYVSHGAGDIVVLALAGTAAVFFAC
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
SAYVLTTKKDMSFLSGTIFALFIVLLLGMVASFFFQSPMLYIAISGLFVVFSTLGILYET
HHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
SNIIHGGETNYIRATVSIFVSLYNLFISLLNIFSILSNED
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100