Click here to switch to the map view.

The map label for this gene is yccS [C]

Identifier: 15602257

GI number: 15602257

Start: 461378

End: 463531

Strand: Reverse

Name: yccS [C]

Synonym: PM0392

Alternate gene names: 15602257

Gene position: 463531-461378 (Counterclockwise)

Preceding gene: 15602258

Following gene: 15602255

Centisome position: 20.53

GC content: 37.93

Gene sequence:

>2154_bases
ATGAATAATTGGTTTAATGCAAAAATTATCGCAACGATCCCCATTTTTATTGCGATAAATATTGCGGCTTTCGCTATTTG
GCTTCTGGATATTTCCGAACAAAGCATGCCGCTTATTTTAGGCATTATTGCTGGCGGATTAGTAGACTTAGATAATCGTT
TAACTGGGCGATTAAAAAATATCTTCTATACCTTACTTGCCTTCTCTATTTCCTCACTAGTGGTGCAAATTAGCATTGGT
CATGGTTTTCAATTTACGCTGTTGATGACTGCCATGACGTTTATGTTTACCATGGTCGGTGCAATAGGACAGCGCTATAG
CACCATTGCCTTTGGCACTTTAGTTATCGCCCTTTACACAACGCTTTCTTACTTGCCAGAAACTATTTGGTTTATCAACC
CCATTATGATTTTATGTGGGACATTGCTTTACAGCATGATCACTTTAGTTGTGCATTTGTTTTTTCCTAATCGTCCAGTA
CAAGAAAGTATCGCGAAATCCTTCTTAGCCTTGGGACACTATCTTGACGCGAAATCACAATTTTTTGATCCCGATGAAAT
TGAACAACTGGCGAATAAAGAAGTGAATTTAGCCATGAAAGACAGTGCGCTTATTGAGGCATTTAATGCCACCAGAATTG
CTCTGTTCTATCGTATTCGAGGTCAAAACCGCCATAGCCGCACACAAAAAATGATCCGTTATTATTTTGCGGCACAAGAC
ATTCATGAGCGCGCGAACTCCAGTCTATTTAATTATCATACTATGGCGGAACAGCTCAAAAACACGGATCTCATTTTTCG
TATTCAACGCTTATTCGAATTACAAGCCCAAGCCTGTCGCGAAATCGGTTTAAGTTTACAGCAAAATAAAGAGTACCATT
ACAATAATAAAGTCGAAAAAGCGATTGTAGGGCTAAATCAATCTTTTGAATTGTATGCAAAAACCCATCTAGAAAATGAA
CAAGTGGTGCTAAATCTTAAGACCTTGATTGAAAACCTGCAAGCTGTTGAATGGCAACTTAGTCATCTTGATCAAGAAAC
ACACCAAGCTGAACGTGCATCTACCGCTAAAATTCATACAGAACAAGTTCGTGGTTTACGTAATATCCTGTATGCAATGA
AAAGTCACTGCCATTTTAATTCTCAACTGTTTCGACATGCTGTTCGCTTATCTATCGTCGTTTTTACCGCTTGTTCTATT
GTTGAATTTTTTCAATTAGAGCGAGGTTATTGGATTTTATTAACCTCCGTTTTTGTCTGTCAGCCCAATTATTCCGCTAC
TAAACTGCGCCTTCGTCAACGTATTATTGGGACAATTCTAGGCGTCATTATCGGTTCCTTACTGCCTTATATTAATCCAA
CACTGGAACTGCAACTTGGTTTGATTGTGGCAACCAGTACTTTATTTTTCTTTTTTAGAACGAATAACTACAGTTTCTCG
ACTTTCTTTATCACATTACAAGTACTCATCAGCTTTGATGTAATGGGTTTTGATATTCATGAAGCGATGTATTCAAGGGT
AATAGATACATTCATTGGCGCCTTTATTGCTTGGTTTGCTGTGTCTTATTTATGGCCAGATTGGCGTTACTTACAACTCG
ATAAAGTCAGTCGTCAAGCGGTAAAAAGCAATGCCAAATACTTACTTTATGTGATTAGCCAACTGCAATTTGGTAAAGGA
GATAACCTGAAATACCGTATTGTACGTCGCCACGCCCATGAAAATGCCACCGCCCTGAGTACCACCATTTCAAATATGAA
TAATGAACCAAACAAATACCAAGCACATTTGCAAAAAGGTTTTGAGTTACTGAAGATTAATTATTCTTTATTGAGCTATA
TTTCCGCATTAGGCGCTTATCGTAGTAATATGAAGGCATTACAACAAAATACCGAATTTCTGGCAGGATTTTATCCAATT
GCCAAGAAAATTATTTATGTATTGGAGCATATTGAAAAACTCAGACCCGAGGTGTTCCAAAAAATGCAAGAAAGGATTGA
GAGTGATTTAAAGCACGCGAACGCTGAGCAAGCCGGTCATCTATTTCAACCGCAGTTTAGCGTGCCGATTCAGCAATTGA
ATATGATTAGTCAGATCTTGCCTTCACTTTACCATACGTTTCAACAAATCAACTTAAACCTCAAACAAAATTAA

Upstream 100 bases:

>100_bases
CAAAGAAGTGGCTGAAATCGCAAGACAACAAGCAGCACAACAATATTATCAGCGCCGTCATCACTAAATAAAGGACTCAA
GGAATGAGAGAAGAACACGC

Downstream 100 bases:

>100_bases
AATAGCTGCATCACCGCCCCATGCTTTTGGGGCTTGATGTAAGGCGCGTACTTTAGGATGTTGTACTAACCAACGTGGAA
TTTGGCGCTTTAAAATATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MNNWFNAKIIATIPIFIAINIAAFAIWLLDISEQSMPLILGIIAGGLVDLDNRLTGRLKNIFYTLLAFSISSLVVQISIG
HGFQFTLLMTAMTFMFTMVGAIGQRYSTIAFGTLVIALYTTLSYLPETIWFINPIMILCGTLLYSMITLVVHLFFPNRPV
QESIAKSFLALGHYLDAKSQFFDPDEIEQLANKEVNLAMKDSALIEAFNATRIALFYRIRGQNRHSRTQKMIRYYFAAQD
IHERANSSLFNYHTMAEQLKNTDLIFRIQRLFELQAQACREIGLSLQQNKEYHYNNKVEKAIVGLNQSFELYAKTHLENE
QVVLNLKTLIENLQAVEWQLSHLDQETHQAERASTAKIHTEQVRGLRNILYAMKSHCHFNSQLFRHAVRLSIVVFTACSI
VEFFQLERGYWILLTSVFVCQPNYSATKLRLRQRIIGTILGVIIGSLLPYINPTLELQLGLIVATSTLFFFFRTNNYSFS
TFFITLQVLISFDVMGFDIHEAMYSRVIDTFIGAFIAWFAVSYLWPDWRYLQLDKVSRQAVKSNAKYLLYVISQLQFGKG
DNLKYRIVRRHAHENATALSTTISNMNNEPNKYQAHLQKGFELLKINYSLLSYISALGAYRSNMKALQQNTEFLAGFYPI
AKKIIYVLEHIEKLRPEVFQKMQERIESDLKHANAEQAGHLFQPQFSVPIQQLNMISQILPSLYHTFQQINLNLKQN

Sequences:

>Translated_717_residues
MNNWFNAKIIATIPIFIAINIAAFAIWLLDISEQSMPLILGIIAGGLVDLDNRLTGRLKNIFYTLLAFSISSLVVQISIG
HGFQFTLLMTAMTFMFTMVGAIGQRYSTIAFGTLVIALYTTLSYLPETIWFINPIMILCGTLLYSMITLVVHLFFPNRPV
QESIAKSFLALGHYLDAKSQFFDPDEIEQLANKEVNLAMKDSALIEAFNATRIALFYRIRGQNRHSRTQKMIRYYFAAQD
IHERANSSLFNYHTMAEQLKNTDLIFRIQRLFELQAQACREIGLSLQQNKEYHYNNKVEKAIVGLNQSFELYAKTHLENE
QVVLNLKTLIENLQAVEWQLSHLDQETHQAERASTAKIHTEQVRGLRNILYAMKSHCHFNSQLFRHAVRLSIVVFTACSI
VEFFQLERGYWILLTSVFVCQPNYSATKLRLRQRIIGTILGVIIGSLLPYINPTLELQLGLIVATSTLFFFFRTNNYSFS
TFFITLQVLISFDVMGFDIHEAMYSRVIDTFIGAFIAWFAVSYLWPDWRYLQLDKVSRQAVKSNAKYLLYVISQLQFGKG
DNLKYRIVRRHAHENATALSTTISNMNNEPNKYQAHLQKGFELLKINYSLLSYISALGAYRSNMKALQQNTEFLAGFYPI
AKKIIYVLEHIEKLRPEVFQKMQERIESDLKHANAEQAGHLFQPQFSVPIQQLNMISQILPSLYHTFQQINLNLKQN
>Mature_717_residues
MNNWFNAKIIATIPIFIAINIAAFAIWLLDISEQSMPLILGIIAGGLVDLDNRLTGRLKNIFYTLLAFSISSLVVQISIG
HGFQFTLLMTAMTFMFTMVGAIGQRYSTIAFGTLVIALYTTLSYLPETIWFINPIMILCGTLLYSMITLVVHLFFPNRPV
QESIAKSFLALGHYLDAKSQFFDPDEIEQLANKEVNLAMKDSALIEAFNATRIALFYRIRGQNRHSRTQKMIRYYFAAQD
IHERANSSLFNYHTMAEQLKNTDLIFRIQRLFELQAQACREIGLSLQQNKEYHYNNKVEKAIVGLNQSFELYAKTHLENE
QVVLNLKTLIENLQAVEWQLSHLDQETHQAERASTAKIHTEQVRGLRNILYAMKSHCHFNSQLFRHAVRLSIVVFTACSI
VEFFQLERGYWILLTSVFVCQPNYSATKLRLRQRIIGTILGVIIGSLLPYINPTLELQLGLIVATSTLFFFFRTNNYSFS
TFFITLQVLISFDVMGFDIHEAMYSRVIDTFIGAFIAWFAVSYLWPDWRYLQLDKVSRQAVKSNAKYLLYVISQLQFGKG
DNLKYRIVRRHAHENATALSTTISNMNNEPNKYQAHLQKGFELLKINYSLLSYISALGAYRSNMKALQQNTEFLAGFYPI
AKKIIYVLEHIEKLRPEVFQKMQERIESDLKHANAEQAGHLFQPQFSVPIQQLNMISQILPSLYHTFQQINLNLKQN

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=703, Percent_Identity=36.9843527738265, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI87082248, Length=504, Percent_Identity=23.015873015873, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82647; Mature: 82647

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNWFNAKIIATIPIFIAINIAAFAIWLLDISEQSMPLILGIIAGGLVDLDNRLTGRLKN
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
IFYTLLAFSISSLVVQISIGHGFQFTLLMTAMTFMFTMVGAIGQRYSTIAFGTLVIALYT
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSYLPETIWFINPIMILCGTLLYSMITLVVHLFFPNRPVQESIAKSFLALGHYLDAKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHC
FFDPDEIEQLANKEVNLAMKDSALIEAFNATRIALFYRIRGQNRHSRTQKMIRYYFAAQD
CCCHHHHHHHCCCCCCEEECHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
IHERANSSLFNYHTMAEQLKNTDLIFRIQRLFELQAQACREIGLSLQQNKEYHYNNKVEK
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH
AIVGLNQSFELYAKTHLENEQVVLNLKTLIENLQAVEWQLSHLDQETHQAERASTAKIHT
HHHCCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EQVRGLRNILYAMKSHCHFNSQLFRHAVRLSIVVFTACSIVEFFQLERGYWILLTSVFVC
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHC
QPNYSATKLRLRQRIIGTILGVIIGSLLPYINPTLELQLGLIVATSTLFFFFRTNNYSFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHH
TFFITLQVLISFDVMGFDIHEAMYSRVIDTFIGAFIAWFAVSYLWPDWRYLQLDKVSRQA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH
VKSNAKYLLYVISQLQFGKGDNLKYRIVRRHAHENATALSTTISNMNNEPNKYQAHLQKG
HHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCC
FELLKINYSLLSYISALGAYRSNMKALQQNTEFLAGFYPIAKKIIYVLEHIEKLRPEVFQ
HHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMQERIESDLKHANAEQAGHLFQPQFSVPIQQLNMISQILPSLYHTFQQINLNLKQN
HHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNNWFNAKIIATIPIFIAINIAAFAIWLLDISEQSMPLILGIIAGGLVDLDNRLTGRLKN
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
IFYTLLAFSISSLVVQISIGHGFQFTLLMTAMTFMFTMVGAIGQRYSTIAFGTLVIALYT
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSYLPETIWFINPIMILCGTLLYSMITLVVHLFFPNRPVQESIAKSFLALGHYLDAKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHC
FFDPDEIEQLANKEVNLAMKDSALIEAFNATRIALFYRIRGQNRHSRTQKMIRYYFAAQD
CCCHHHHHHHCCCCCCEEECHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
IHERANSSLFNYHTMAEQLKNTDLIFRIQRLFELQAQACREIGLSLQQNKEYHYNNKVEK
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH
AIVGLNQSFELYAKTHLENEQVVLNLKTLIENLQAVEWQLSHLDQETHQAERASTAKIHT
HHHCCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EQVRGLRNILYAMKSHCHFNSQLFRHAVRLSIVVFTACSIVEFFQLERGYWILLTSVFVC
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHC
QPNYSATKLRLRQRIIGTILGVIIGSLLPYINPTLELQLGLIVATSTLFFFFRTNNYSFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHH
TFFITLQVLISFDVMGFDIHEAMYSRVIDTFIGAFIAWFAVSYLWPDWRYLQLDKVSRQA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH
VKSNAKYLLYVISQLQFGKGDNLKYRIVRRHAHENATALSTTISNMNNEPNKYQAHLQKG
HHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCC
FELLKINYSLLSYISALGAYRSNMKALQQNTEFLAGFYPIAKKIIYVLEHIEKLRPEVFQ
HHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMQERIESDLKHANAEQAGHLFQPQFSVPIQQLNMISQILPSLYHTFQQINLNLKQN
HHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]