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The map label for this gene is yfcN [C]

Identifier: 15602256

GI number: 15602256

Start: 460892

End: 461398

Strand: Direct

Name: yfcN [C]

Synonym: PM0391

Alternate gene names: 15602256

Gene position: 460892-461398 (Clockwise)

Preceding gene: 15602254

Following gene: 15602261

Centisome position: 20.42

GC content: 40.63

Gene sequence:

>507_bases
ATGTTAGAGCCGGATGATATTGCGTTATTCCGCGGTGCAGTCAAAGGGGTGAAAGCGCTTAAGCAGGATAAGTTTATTGC
CCCTCGTCAGAAAATGTCTAAAAAGAAATCAACATTAAGAGATATTCGCGAAAAAGAGGATACCCTCTTTTACTTCTCTG
ATGAATATGAGCCATTGTTAAATGAAGAAAGTGCGGTGAGATATTTACGTGAAGGCGAAGATTCTCATATTTTAAAGCAA
TTACGGCGCGGTGATTTTTCGCCAGAACTTTTTTTGGATCTTCATGGGCTGACTAAAGAACAAGCGAAAATAGAACTCGC
CAGTTTATTACAAGCCTGCGAAAATGAACATGTGTATTGCGCGAGTGTGATGACCGGTTATGGTTCGTATATTTTAAAGC
GCCAAATTCCACGTTGGTTAGTACAACATCCTAAAGTACGCGCCTTACATCAAGCCCCAAAAGCATGGGGCGGTGATGCA
GCTATTTTAATTTTGTTTGAGGTTTAA

Upstream 100 bases:

>100_bases
AAAACTGGCGTAGTTATATCATATTCCGCCAAATTTTGGAAATCATGTCTCATAAAGATATGTTATTATGAATCTATTTG
AATATGGAGAGCAAAAGAAT

Downstream 100 bases:

>100_bases
GTTGATTTGTTGAAACGTATGGTAAAGTGAAGGCAAGATCTGACTAATCATATTCAATTGCTGAATCGGCACGCTAAACT
GCGGTTGAAATAGATGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLEPDDIALFRGAVKGVKALKQDKFIAPRQKMSKKKSTLRDIREKEDTLFYFSDEYEPLLNEESAVRYLREGEDSHILKQ
LRRGDFSPELFLDLHGLTKEQAKIELASLLQACENEHVYCASVMTGYGSYILKRQIPRWLVQHPKVRALHQAPKAWGGDA
AILILFEV

Sequences:

>Translated_168_residues
MLEPDDIALFRGAVKGVKALKQDKFIAPRQKMSKKKSTLRDIREKEDTLFYFSDEYEPLLNEESAVRYLREGEDSHILKQ
LRRGDFSPELFLDLHGLTKEQAKIELASLLQACENEHVYCASVMTGYGSYILKRQIPRWLVQHPKVRALHQAPKAWGGDA
AILILFEV
>Mature_168_residues
MLEPDDIALFRGAVKGVKALKQDKFIAPRQKMSKKKSTLRDIREKEDTLFYFSDEYEPLLNEESAVRYLREGEDSHILKQ
LRRGDFSPELFLDLHGLTKEQAKIELASLLQACENEHVYCASVMTGYGSYILKRQIPRWLVQHPKVRALHQAPKAWGGDA
AILILFEV

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain

Homologues:

Organism=Escherichia coli, GI1788671, Length=168, Percent_Identity=53.5714285714286, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y391_PASMU (Q9CNN6)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245328.1
- ProteinModelPortal:   Q9CNN6
- SMR:   Q9CNN6
- GeneID:   1243738
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0391
- NMPDR:   fig|272843.1.peg.391
- HOGENOM:   HBG700609
- OMA:   CACIMHG
- ProtClustDB:   PRK04946
- BioCyc:   PMUL272843:PM0391-MONOMER
- HAMAP:   MF_01042
- InterPro:   IPR002625
- InterPro:   IPR022990
- SMART:   SM00463

Pfam domain/function: PF01713 Smr

EC number: NA

Molecular weight: Translated: 19345; Mature: 19345

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPDDIALFRGAVKGVKALKQDKFIAPRQKMSKKKSTLRDIREKEDTLFYFSDEYEPLL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
NEESAVRYLREGEDSHILKQLRRGDFSPELFLDLHGLTKEQAKIELASLLQACENEHVYC
CHHHHHHHHHCCCHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
ASVMTGYGSYILKRQIPRWLVQHPKVRALHQAPKAWGGDAAILILFEV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MLEPDDIALFRGAVKGVKALKQDKFIAPRQKMSKKKSTLRDIREKEDTLFYFSDEYEPLL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
NEESAVRYLREGEDSHILKQLRRGDFSPELFLDLHGLTKEQAKIELASLLQACENEHVYC
CHHHHHHHHHCCCHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
ASVMTGYGSYILKRQIPRWLVQHPKVRALHQAPKAWGGDAAILILFEV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100