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The map label for this gene is ompH_1

Identifier: 15602253

GI number: 15602253

Start: 457472

End: 458518

Strand: Direct

Name: ompH_1

Synonym: PM0388

Alternate gene names: 15602253

Gene position: 457472-458518 (Clockwise)

Preceding gene: 15602244

Following gene: 15602254

Centisome position: 20.26

GC content: 38.59

Gene sequence:

>1047_bases
ATGAAAAAGACAATCGTAGCATTAGCAGTCGCAGCAGTAGCAGCAACTTCAGCAAACGCAGCAACAGTTTACAATCAAGA
CGGTACAAAAGTTGATGTAAATGGTTCTGTACGTTTACTCCTCAAAAAAGAAAAAGATAAACGTGGTGATTTAATGGATA
ATGGTTCACGCGTTTCTTTCAAAGCATCTCATGACTTAGGTGAAGGGTTAAGTGCGTTAGCATATGCAGAACTTCGTTTT
AGTAAAGATGTGAAAAACAAAGATGGTGAAGTGATTAAACAACCAATTGGTAATAATGTCCATGCTAAACGTCTTTACGC
AGGTTTCGCTTATGAAGGTGTAGGTACATTAACATTTGGTAATCAATTAACTATCGGTGATGATGTTGGTGTGTCTGACT
ATACATACTTCTTAGGTGGTATCAACAATCTTCTTTCTAGTGGCGAAAAAGCGATTAACTTTAAATCAGCAGAATTTAAT
GGTTTAACATTTGGCGGTGCTTACGTTTTCTCTGATGATTTTGATAAAAACGGATTACGTGATGGTCGTGGTTTCGTTGT
AGCGGGTTTATATAACAGAAAAATCGGTGATGTTGGTTTCGCGTTTGAAGCAGGCTATAGCCAAAAATATGTGAAACAAG
AAGTAGCTTCAGTATTACCACCACCTCCTGGCTCAGTAACAGTTTACAAAGATGAAAAAGAGAAAGCATTCATGGTTGGT
GCGGAGTTATCATATGCTGGTTTAGCACTTGGTGTTGACTACGCACAATCTAAAGTGACTAACGTGGATGGTAAAAAACG
TGCACTTGAAGTGGGCTTAAACTATGATATTAATGATAAAGCAAAAGTTTACACTGATTTCATTTGGGCAAAAGAAGGTC
CAAAAGGTGCGACTACAAGAGATCGTTCTATCATCTTAGGTGCGGGCTACAAGCTTCACAAACAAGTTGAAACCTTTGTT
GAAGGTGGCTGGGGCAGAGAGAAAGATGCTAATGGCGTAACAACAAAAGACAATGTTGTTGGTGTTGGTTTACGCGTACA
CTTCTAA

Upstream 100 bases:

>100_bases
CAGACGACTTATCGTCTGTTAGTCGATTTTAGGTTGATTGAGTGATTGGCAACAATCATTTAATCGAATTATAAAACTCC
AAAAACAAGGTAGTGATACT

Downstream 100 bases:

>100_bases
TTTTTGTTAGAATCTAAAAAAGCCAGTGTTTAACACTGGCTTTTTATTGAGTTTTATTTGTGTTATTCACGATAAATTGA
GTATTTTGAAAGTCGTTATG

Product: OmpH

Products: NA

Alternate protein names: MOMP; Outer membrane protein H

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKKTIVALAVAAVAATSANAATVYNQDGTKVDVNGSVRLLLKKEKDKRGDLMDNGSRVSFKASHDLGEGLSALAYAELRF
SKDVKNKDGEVIKQPIGNNVHAKRLYAGFAYEGVGTLTFGNQLTIGDDVGVSDYTYFLGGINNLLSSGEKAINFKSAEFN
GLTFGGAYVFSDDFDKNGLRDGRGFVVAGLYNRKIGDVGFAFEAGYSQKYVKQEVASVLPPPPGSVTVYKDEKEKAFMVG
AELSYAGLALGVDYAQSKVTNVDGKKRALEVGLNYDINDKAKVYTDFIWAKEGPKGATTRDRSIILGAGYKLHKQVETFV
EGGWGREKDANGVTTKDNVVGVGLRVHF

Sequences:

>Translated_348_residues
MKKTIVALAVAAVAATSANAATVYNQDGTKVDVNGSVRLLLKKEKDKRGDLMDNGSRVSFKASHDLGEGLSALAYAELRF
SKDVKNKDGEVIKQPIGNNVHAKRLYAGFAYEGVGTLTFGNQLTIGDDVGVSDYTYFLGGINNLLSSGEKAINFKSAEFN
GLTFGGAYVFSDDFDKNGLRDGRGFVVAGLYNRKIGDVGFAFEAGYSQKYVKQEVASVLPPPPGSVTVYKDEKEKAFMVG
AELSYAGLALGVDYAQSKVTNVDGKKRALEVGLNYDINDKAKVYTDFIWAKEGPKGATTRDRSIILGAGYKLHKQVETFV
EGGWGREKDANGVTTKDNVVGVGLRVHF
>Mature_348_residues
MKKTIVALAVAAVAATSANAATVYNQDGTKVDVNGSVRLLLKKEKDKRGDLMDNGSRVSFKASHDLGEGLSALAYAELRF
SKDVKNKDGEVIKQPIGNNVHAKRLYAGFAYEGVGTLTFGNQLTIGDDVGVSDYTYFLGGINNLLSSGEKAINFKSAEFN
GLTFGGAYVFSDDFDKNGLRDGRGFVVAGLYNRKIGDVGFAFEAGYSQKYVKQEVASVLPPPPGSVTVYKDEKEKAFMVG
AELSYAGLALGVDYAQSKVTNVDGKKRALEVGLNYDINDKAKVYTDFIWAKEGPKGATTRDRSIILGAGYKLHKQVETFV
EGGWGREKDANGVTTKDNVVGVGLRVHF

Specific function: Structural rigidity of the outer membrane of elementary bodies and porin forming, permitting diffusion of solutes through the intracellular reticulate body membrane

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 794 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): OMPH1_PASMU (Q9CNN9)

Other databases:

- EMBL:   AE004439
- EMBL:   U52207
- EMBL:   U52209
- RefSeq:   NP_245325.1
- ProteinModelPortal:   Q9CNN9
- GeneID:   1243735
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0388
- NMPDR:   fig|272843.1.peg.388
- HOGENOM:   HBG495715
- OMA:   TYLEGGS
- ProtClustDB:   CLSK870077
- BioCyc:   PMUL272843:PM0388-MONOMER
- InterPro:   IPR001702
- InterPro:   IPR002299
- Gene3D:   G3DSA:2.40.160.10
- PRINTS:   PR00184

Pfam domain/function: PF00267 Porin_1

EC number: NA

Molecular weight: Translated: 37451; Mature: 37451

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIVALAVAAVAATSANAATVYNQDGTKVDVNGSVRLLLKKEKDKRGDLMDNGSRVSF
CCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEE
KASHDLGEGLSALAYAELRFSKDVKNKDGEVIKQPIGNNVHAKRLYAGFAYEGVGTLTFG
EECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHEEECEEECCEEEEEEC
NQLTIGDDVGVSDYTYFLGGINNLLSSGEKAINFKSAEFNGLTFGGAYVFSDDFDKNGLR
CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCEEEECCCCCCCCCC
DGRGFVVAGLYNRKIGDVGFAFEAGYSQKYVKQEVASVLPPPPGSVTVYKDEKEKAFMVG
CCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEE
AELSYAGLALGVDYAQSKVTNVDGKKRALEVGLNYDINDKAKVYTDFIWAKEGPKGATTR
CCCCCCEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCC
DRSIILGAGYKLHKQVETFVEGGWGREKDANGVTTKDNVVGVGLRVHF
CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKTIVALAVAAVAATSANAATVYNQDGTKVDVNGSVRLLLKKEKDKRGDLMDNGSRVSF
CCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEE
KASHDLGEGLSALAYAELRFSKDVKNKDGEVIKQPIGNNVHAKRLYAGFAYEGVGTLTFG
EECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHEEECEEECCEEEEEEC
NQLTIGDDVGVSDYTYFLGGINNLLSSGEKAINFKSAEFNGLTFGGAYVFSDDFDKNGLR
CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCEEEECCCCCCCCCC
DGRGFVVAGLYNRKIGDVGFAFEAGYSQKYVKQEVASVLPPPPGSVTVYKDEKEKAFMVG
CCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEE
AELSYAGLALGVDYAQSKVTNVDGKKRALEVGLNYDINDKAKVYTDFIWAKEGPKGATTR
CCCCCCEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCC
DRSIILGAGYKLHKQVETFVEGGWGREKDANGVTTKDNVVGVGLRVHF
CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100; 10067687