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The map label for this gene is cmoB

Identifier: 15602205

GI number: 15602205

Start: 400505

End: 401470

Strand: Reverse

Name: cmoB

Synonym: PM0340

Alternate gene names: 15602205

Gene position: 401470-400505 (Counterclockwise)

Preceding gene: 15602206

Following gene: 15602203

Centisome position: 17.78

GC content: 44.41

Gene sequence:

>966_bases
ATGATTGACTTTCGTCCTTTTTATCAACACATTGCCACCACTCATTTATCCGCGTGGCTTGAAACCCTTCCCCTGCAATT
AAAACAGTGGGAAAAACAAACCCACGGTGATTATGCGAAATGGGCAAAAATTGTGGATTTTTTACCGCACTTAGACGCAG
ATCATATTGATCTGAAAAGTGCGGTCAAATCTGAGAGTGTTTCGCCGTTGTCTGCTGGTGAGCAACAACGTTTGGTATAT
CACCTCAAACAGCTGATGCCTTGGCGTAAGGGACCTTATCATTTGCACGGGATTCACATCGATTGTGAGTGGCGTTCTGA
TTTCAAATGGGATCGCGTACTGCCCCACCTCGCCCCCCTGAAAGATCGCACGATTTTAGATGTGGGCTGTGGTAGCGGTT
ATCATATGTGGCGCATGGTCGGTGAAGGGGCAAAAATAGTGGTCGGCATTGACCCAACCGAATTATTTTTATGTCAATTT
GAAGCCGTACGTAAACTGTTAAACAATGATCGCCGTGCTAATTTGATTCCCTTAGGCATTGAACAAATGCAACCGTTAGC
AGCCTTTGATACGGTTTTCTCTATGGGCGTGCTTTATCATCGTAAATCACCATTAGATCATTTAAGCCAATTAAAAAACC
AGCTGGTAAGAGGCGGGGAATTGGTACTAGAAACTTTAGTGGTGGACGGTGATATCAACACGGTTTTAGTACCCGCAGAT
CGCTATGCCAAAATGAAAAACGTGTACTTTATCCCGTCTGTACCCGCCTTGATTAACTGGTTGGAAAAAGTCGGCTTTAA
AAACGTGCGTTGTGTAGATGTCGCCCCAACGAGTTTGGCAGAACAGCGTAAAACCGACTGGTTAGAGAACGAATCCTTGA
TTGATTTCCTAGATCCTTGCGATCATACAAAAACGATTGAGGGTTACCAAGCCCCGACCAGAGCCGTAATATTAGCAAAC
AAATAA

Upstream 100 bases:

>100_bases
CAAGCTTGGTGATTATCACCACTTCATTGCTCTCTGCCAAACCAGAAGCACAAATTGTTGACACTTTTGAACAAGCACAA
AAGGCTTATAAAAACGCACT

Downstream 100 bases:

>100_bases
AGCAAAAAACGCTTTGCACGGACATTGTTTGATTTAATACAGAACAATGTCCATCATCTACTAACCTAAAAAAAAGCGGT
GACGCTATAAAAGACTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MIDFRPFYQHIATTHLSAWLETLPLQLKQWEKQTHGDYAKWAKIVDFLPHLDADHIDLKSAVKSESVSPLSAGEQQRLVY
HLKQLMPWRKGPYHLHGIHIDCEWRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKIVVGIDPTELFLCQF
EAVRKLLNNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVRGGELVLETLVVDGDINTVLVPAD
RYAKMKNVYFIPSVPALINWLEKVGFKNVRCVDVAPTSLAEQRKTDWLENESLIDFLDPCDHTKTIEGYQAPTRAVILAN
K

Sequences:

>Translated_321_residues
MIDFRPFYQHIATTHLSAWLETLPLQLKQWEKQTHGDYAKWAKIVDFLPHLDADHIDLKSAVKSESVSPLSAGEQQRLVY
HLKQLMPWRKGPYHLHGIHIDCEWRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKIVVGIDPTELFLCQF
EAVRKLLNNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVRGGELVLETLVVDGDINTVLVPAD
RYAKMKNVYFIPSVPALINWLEKVGFKNVRCVDVAPTSLAEQRKTDWLENESLIDFLDPCDHTKTIEGYQAPTRAVILAN
K
>Mature_321_residues
MIDFRPFYQHIATTHLSAWLETLPLQLKQWEKQTHGDYAKWAKIVDFLPHLDADHIDLKSAVKSESVSPLSAGEQQRLVY
HLKQLMPWRKGPYHLHGIHIDCEWRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKIVVGIDPTELFLCQF
EAVRKLLNNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVRGGELVLETLVVDGDINTVLVPAD
RYAKMKNVYFIPSVPALINWLEKVGFKNVRCVDVAPTSLAEQRKTDWLENESLIDFLDPCDHTKTIEGYQAPTRAVILAN
K

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=64.9068322981366, Blast_Score=438, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_PASMU (Q9CNT5)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245277.1
- ProteinModelPortal:   Q9CNT5
- GeneID:   1243687
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0340
- NMPDR:   fig|272843.1.peg.340
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- ProtClustDB:   PRK15068
- BioCyc:   PMUL272843:PM0340-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 36748; Mature: 36748

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFRPFYQHIATTHLSAWLETLPLQLKQWEKQTHGDYAKWAKIVDFLPHLDADHIDLKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH
AVKSESVSPLSAGEQQRLVYHLKQLMPWRKGPYHLHGIHIDCEWRSDFKWDRVLPHLAPL
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCHHHHCCCCCCC
KDRTILDVGCGSGYHMWRMVGEGAKIVVGIDPTELFLCQFEAVRKLLNNDRRANLIPLGI
CCCEEEEECCCCCHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECH
EQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVRGGELVLETLVVDGDINTVLVPAD
HHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEECCH
RYAKMKNVYFIPSVPALINWLEKVGFKNVRCVDVAPTSLAEQRKTDWLENESLIDFLDPC
HHHHHCCEEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCC
DHTKTIEGYQAPTRAVILANK
CCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIDFRPFYQHIATTHLSAWLETLPLQLKQWEKQTHGDYAKWAKIVDFLPHLDADHIDLKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH
AVKSESVSPLSAGEQQRLVYHLKQLMPWRKGPYHLHGIHIDCEWRSDFKWDRVLPHLAPL
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCHHHHCCCCCCC
KDRTILDVGCGSGYHMWRMVGEGAKIVVGIDPTELFLCQFEAVRKLLNNDRRANLIPLGI
CCCEEEEECCCCCHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECH
EQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVRGGELVLETLVVDGDINTVLVPAD
HHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEECCH
RYAKMKNVYFIPSVPALINWLEKVGFKNVRCVDVAPTSLAEQRKTDWLENESLIDFLDPC
HHHHHCCEEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCC
DHTKTIEGYQAPTRAVILANK
CCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100