Click here to switch to the map view.

The map label for this gene is ydjN [C]

Identifier: 15602200

GI number: 15602200

Start: 389116

End: 390453

Strand: Direct

Name: ydjN [C]

Synonym: PM0335

Alternate gene names: 15602200

Gene position: 389116-390453 (Clockwise)

Preceding gene: 15602199

Following gene: 15602204

Centisome position: 17.24

GC content: 41.41

Gene sequence:

>1338_bases
ATGGTTATTAGCAATCTTATTATTTTCAGTTTACTTTTAGTCTTACTGCGTGTGATTTATACCCGCACCCAAAAACTGGG
CATAACAGTTTTGATTGGTCTTTTACTTGGGGTCATTTGTGGGGTGTTATTACAACAGTTTGCAGCCCCAATGGTGATTA
AACCAACATTAGAATGGATTAATCTGGTTGGTAATGGCTATGTTCGTTTATTACAAATGATCGTGATGCCATTGGTTTTT
GTGTCCATTCTGTCTGCGATAACGCGTTTAAATCAGGCCAGTGCTTTAGGAAAAATCAGCTTAAGTGTCATTTCGGTGTT
ATTGATCACCACCGCGATTGCTGCAGCGATCGGGATTGCTATGACTTATGCATTTGATTTAACGGCAGAAGGCTTGATTG
CAGGGGAGAGAGAGCTTGCTGCACAAACGCATGTAGCAGGACGGGTTGAAAAAGTTAGTGAGCTAACGATTCCTTCTATG
TTGCTTTCTTTTATTCCGAAAAATCCGTTTTTAGAGCTCACAGGGGCAAATCCAACCTCGATTATTAGTGTCGTGATTTT
TGCTGCGTTATTGGGAATAGCGTCGTTAAGTTTAGCAAAAGAAGATCATGCACTTGGCGAACGTATTGCGCAAGGTGTAG
ATACCTTAAATAAATTGATCATGCGTTTAGTGCGTATGGTGATCCGTTTAACACCTTATGGTGTGTTTGCACTCATGTTG
AAAATGGCGACCACCTCAAAATGGGCAGATATTGTAAATCTAGGCACCTTTATTGTTGCTTCGTATGCGGCGATTTTCTT
AATGTTTGTCGTACACGGTCTGTTATTAGCCGTATTCCGTGTGAATCCTTTTACCTATTTTAAGAAAGTAATGCCAACCT
TGAGTTTCGCATTTACTTCGCGTTCAAGTGCGGCAACTTTACCGCTAAATATTGAAACGCAAACCAATAAACTAGGTAAT
AACAATGTGATTGCAAATTTTGCCGCGACTTTTGGTGCGACCATCGGACAAAATGGATGTGCGGGGATTTATCCTGCCAT
GCTAGCGGTAATGGTGGCACCGACAGTGGGGATTGACCCTTTTAGTCTAGGTTATTTAGCTACCTTGATTTTAGTCGTCA
CGATTTCTTCGTTAGGGATTGCTGGTGTTGGCGGTGGTGCCACTTTTGCCGCCATTGTGGTGTTATCGACCTTAAATTTA
CCTCTTGCCTTAGTGGGTTTGTTAATTTCGATTGAGCCATTGATTGATATGGGACGAACTGCTTTAAACGTGAATGGTTC
GATGGTAGCGGGTACGATCACGAATCAACTGTTAGATAAAAAGACAGAAAAGGTATAA

Upstream 100 bases:

>100_bases
AGCGAAAAGGTATAAATAATCACTAAAAAAGGGTTGTTATTTATAAAGAATTCTCATTTAATTCATATCCGTCTATTTTA
TTTTTTGATTAGAGTACTTT

Downstream 100 bases:

>100_bases
AACAGAAAGAAAAAAGAGGTGGTAAAAAATGACCACCTCTTTTTTATGGACTAGAAAGTCAGCTCTGCATTTAAACGGAA
GTTACGTCCTGGTGCGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MVISNLIIFSLLLVLLRVIYTRTQKLGITVLIGLLLGVICGVLLQQFAAPMVIKPTLEWINLVGNGYVRLLQMIVMPLVF
VSILSAITRLNQASALGKISLSVISVLLITTAIAAAIGIAMTYAFDLTAEGLIAGERELAAQTHVAGRVEKVSELTIPSM
LLSFIPKNPFLELTGANPTSIISVVIFAALLGIASLSLAKEDHALGERIAQGVDTLNKLIMRLVRMVIRLTPYGVFALML
KMATTSKWADIVNLGTFIVASYAAIFLMFVVHGLLLAVFRVNPFTYFKKVMPTLSFAFTSRSSAATLPLNIETQTNKLGN
NNVIANFAATFGATIGQNGCAGIYPAMLAVMVAPTVGIDPFSLGYLATLILVVTISSLGIAGVGGGATFAAIVVLSTLNL
PLALVGLLISIEPLIDMGRTALNVNGSMVAGTITNQLLDKKTEKV

Sequences:

>Translated_445_residues
MVISNLIIFSLLLVLLRVIYTRTQKLGITVLIGLLLGVICGVLLQQFAAPMVIKPTLEWINLVGNGYVRLLQMIVMPLVF
VSILSAITRLNQASALGKISLSVISVLLITTAIAAAIGIAMTYAFDLTAEGLIAGERELAAQTHVAGRVEKVSELTIPSM
LLSFIPKNPFLELTGANPTSIISVVIFAALLGIASLSLAKEDHALGERIAQGVDTLNKLIMRLVRMVIRLTPYGVFALML
KMATTSKWADIVNLGTFIVASYAAIFLMFVVHGLLLAVFRVNPFTYFKKVMPTLSFAFTSRSSAATLPLNIETQTNKLGN
NNVIANFAATFGATIGQNGCAGIYPAMLAVMVAPTVGIDPFSLGYLATLILVVTISSLGIAGVGGGATFAAIVVLSTLNL
PLALVGLLISIEPLIDMGRTALNVNGSMVAGTITNQLLDKKTEKV
>Mature_445_residues
MVISNLIIFSLLLVLLRVIYTRTQKLGITVLIGLLLGVICGVLLQQFAAPMVIKPTLEWINLVGNGYVRLLQMIVMPLVF
VSILSAITRLNQASALGKISLSVISVLLITTAIAAAIGIAMTYAFDLTAEGLIAGERELAAQTHVAGRVEKVSELTIPSM
LLSFIPKNPFLELTGANPTSIISVVIFAALLGIASLSLAKEDHALGERIAQGVDTLNKLIMRLVRMVIRLTPYGVFALML
KMATTSKWADIVNLGTFIVASYAAIFLMFVVHGLLLAVFRVNPFTYFKKVMPTLSFAFTSRSSAATLPLNIETQTNKLGN
NNVIANFAATFGATIGQNGCAGIYPAMLAVMVAPTVGIDPFSLGYLATLILVVTISSLGIAGVGGGATFAAIVVLSTLNL
PLALVGLLISIEPLIDMGRTALNVNGSMVAGTITNQLLDKKTEKV

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI21314632, Length=427, Percent_Identity=25.9953161592506, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI223468566, Length=285, Percent_Identity=27.3684210526316, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI223468564, Length=277, Percent_Identity=27.0758122743682, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI5032093, Length=405, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI169790839, Length=272, Percent_Identity=25.7352941176471, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4827012, Length=274, Percent_Identity=27.3722627737226, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI40254478, Length=230, Percent_Identity=28.2608695652174, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI66773030, Length=247, Percent_Identity=29.1497975708502, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI194239697, Length=269, Percent_Identity=24.5353159851301, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1788024, Length=446, Percent_Identity=58.2959641255605, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1790514, Length=428, Percent_Identity=23.8317757009346, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789947, Length=412, Percent_Identity=24.5145631067961, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193206505, Length=462, Percent_Identity=24.8917748917749, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71983099, Length=459, Percent_Identity=23.9651416122004, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71983106, Length=465, Percent_Identity=24.5161290322581, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17537407, Length=427, Percent_Identity=23.8875878220141, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI193206654, Length=462, Percent_Identity=24.2424242424242, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71996953, Length=434, Percent_Identity=25.1152073732719, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17541374, Length=425, Percent_Identity=24, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24583025, Length=453, Percent_Identity=24.9448123620309, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17137668, Length=453, Percent_Identity=24.9448123620309, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24583023, Length=453, Percent_Identity=24.9448123620309, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 47144; Mature: 47144

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISNLIIFSLLLVLLRVIYTRTQKLGITVLIGLLLGVICGVLLQQFAAPMVIKPTLEWI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
NLVGNGYVRLLQMIVMPLVFVSILSAITRLNQASALGKISLSVISVLLITTAIAAAIGIA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTYAFDLTAEGLIAGERELAAQTHVAGRVEKVSELTIPSMLLSFIPKNPFLELTGANPTS
HHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHH
IISVVIFAALLGIASLSLAKEDHALGERIAQGVDTLNKLIMRLVRMVIRLTPYGVFALML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KMATTSKWADIVNLGTFIVASYAAIFLMFVVHGLLLAVFRVNPFTYFKKVMPTLSFAFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
RSSAATLPLNIETQTNKLGNNNVIANFAATFGATIGQNGCAGIYPAMLAVMVAPTVGIDP
CCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
FSLGYLATLILVVTISSLGIAGVGGGATFAAIVVLSTLNLPLALVGLLISIEPLIDMGRT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
ALNVNGSMVAGTITNQLLDKKTEKV
EEECCCCEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVISNLIIFSLLLVLLRVIYTRTQKLGITVLIGLLLGVICGVLLQQFAAPMVIKPTLEWI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
NLVGNGYVRLLQMIVMPLVFVSILSAITRLNQASALGKISLSVISVLLITTAIAAAIGIA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTYAFDLTAEGLIAGERELAAQTHVAGRVEKVSELTIPSMLLSFIPKNPFLELTGANPTS
HHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHH
IISVVIFAALLGIASLSLAKEDHALGERIAQGVDTLNKLIMRLVRMVIRLTPYGVFALML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KMATTSKWADIVNLGTFIVASYAAIFLMFVVHGLLLAVFRVNPFTYFKKVMPTLSFAFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
RSSAATLPLNIETQTNKLGNNNVIANFAATFGATIGQNGCAGIYPAMLAVMVAPTVGIDP
CCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
FSLGYLATLILVVTISSLGIAGVGGGATFAAIVVLSTLNLPLALVGLLISIEPLIDMGRT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
ALNVNGSMVAGTITNQLLDKKTEKV
EEECCCCEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]