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The map label for this gene is yfhQ [C]

Identifier: 15602181

GI number: 15602181

Start: 372771

End: 373487

Strand: Direct

Name: yfhQ [C]

Synonym: PM0316

Alternate gene names: 15602181

Gene position: 372771-373487 (Clockwise)

Preceding gene: 15602179

Following gene: 15602182

Centisome position: 16.51

GC content: 40.86

Gene sequence:

>717_bases
ATGTTGGAAAATATCCGAATTGTATTAGTTGAAACTTCGCACAGTGGCAATATTGGCTCTGCTGCTAGGGCGATGAAAAC
CATGGGCTTAAATCAGTTATATCTTGTGGCACCTAAACAACCTCTTGATGAACATGCCATTGCGTTATCTGCAGGGGCTG
AAGATGTGTTGAAACAGGCGAAAATTGTAGCAAGTTTTGATGAGGCAGTGGCAGATTGTGCGTTAGTGATTGGCACCAGT
GCAAGATTACGCCACTTACAAAATAGCTTAATTGAACCGCGTGAGTGTGGTACTCGCGCAATAGCATATGCAAAACAAGC
GCCAGTAGCGATTGTATTCGGGCGCGAACGTATTGGGTTGACCAATGAAGAATTGCTTAAGTGCCGTTATCATTTAACGA
TACCCGCTAATCCTGACTATTCATCTTTGAATCTGGCGATGGCAGTACAATTGATTTGTTATGAACTACGTTTGGCATTT
TTGTCACAACAAGCAATGACAGAATCACTTTCAACGATAGATAATACCTATCCAACACACACTGAAATAGAACACTTTTT
TCAGCATACAGAGCGACTTTATACGGCATTAGGATTTATTCAAAATCAAGGTGTTATGCCGAAATTAAGGCGTTTATATC
AGCGTGTTCAGTTAGAAAAAAACGAGCTCAATATTTTACGTGGGATGTTGACCGCAGTGGAAAAGCGTTTGAAATAG

Upstream 100 bases:

>100_bases
AGTAGACTGACGAGATTTCTCAGAAAAATGATAAGTTGTTGACTAAAATTCAGGGTTATTATGCTAGAATAGCGCCTATT
TTATACAAAGATATCAGGTT

Downstream 100 bases:

>100_bases
CGCGGAGGAATAGTTGACTAATTTAGTATGATATGTAAATATTCGCCAATTGTTGGATTAAATTAAAGGAAGATAAAGAT
GAAATTAACTTCTAAAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQAKIVASFDEAVADCALVIGTS
ARLRHLQNSLIEPRECGTRAIAYAKQAPVAIVFGRERIGLTNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAF
LSQQAMTESLSTIDNTYPTHTEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK

Sequences:

>Translated_238_residues
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQAKIVASFDEAVADCALVIGTS
ARLRHLQNSLIEPRECGTRAIAYAKQAPVAIVFGRERIGLTNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAF
LSQQAMTESLSTIDNTYPTHTEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK
>Mature_238_residues
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQAKIVASFDEAVADCALVIGTS
ARLRHLQNSLIEPRECGTRAIAYAKQAPVAIVFGRERIGLTNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAF
LSQQAMTESLSTIDNTYPTHTEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=241, Percent_Identity=56.4315352697095, Blast_Score=273, Evalue=7e-75,
Organism=Escherichia coli, GI1790865, Length=238, Percent_Identity=32.7731092436975, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 26647; Mature: 26647

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQA
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHEEECCCHHHHHHHH
KIVASFDEAVADCALVIGTSARLRHLQNSLIEPRECGTRAIAYAKQAPVAIVFGRERIGL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCHHHHHHHHCCCEEEEECCCCCCC
TNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAFLSQQAMTESLSTIDNTYPTH
CHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQA
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHEEECCCHHHHHHHH
KIVASFDEAVADCALVIGTSARLRHLQNSLIEPRECGTRAIAYAKQAPVAIVFGRERIGL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCHHHHHHHHCCCEEEEECCCCCCC
TNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAFLSQQAMTESLSTIDNTYPTH
CHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]