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The map label for this gene is lspB_2 [H]

Identifier: 15601923

GI number: 15601923

Start: 73336

End: 74742

Strand: Direct

Name: lspB_2 [H]

Synonym: PM0058

Alternate gene names: 15601923

Gene position: 73336-74742 (Clockwise)

Preceding gene: 15601922

Following gene: 15601924

Centisome position: 3.25

GC content: 36.25

Gene sequence:

>1407_bases
ATCATTCATGCTTACCAAAACCAGCCCCTATCAACAAAAGTTGTTTTTCAATTAGTGAAAGATTTGACGGAAGTTTTATA
CCGTTCTGGCTACGTGACAAGTGCAATTGGTTTAAAAAATTCAAAAATCAGCAATGGCGATCTTGAATTTATTGTACTGT
GGGGAAGAACTCGCGATCTGCTTGTGAATGGGGAGAAACCAACCCGTTTTAGAGATAAAACAATGTTATCAGTCCTACCC
AATTTAATCGGAAATCGCTTAAGTATTCACGACATTGACCAGTTGATCGAAATCTTAAATACTACGAATAAAAAAGCCAC
AGTGAATGTGGTTGCAAGTGAAGAAAAAGGCAGCTCAAATCTAAATATTGAAAGACAATATGATGTTTTTCCCCAAGTAA
GTCTAGGGTTCAATAATTCAGGTGTAGAAAATAATGCAAATGGGCGTAATCAAGTCACATTAAATGTTGCTTGGAGTGAC
TTATTAGGGACGAATGATCGTTGGAATTTTTCGAGTAGCTACCGCTTATATAAAGATCGTCATGCTAACCAGCAGCGCAA
TTACGCCTTATCTTATAGTCAGCCGATAGGCTTTTCCACAGTAGAAGTTAAAGCATCGGAATCTTCTTATGAAAAAGAAC
TCCGTGGCATAACCGTCAATTCCTCTAATGGTAAAACACGAAACTTAGCAGTAAAGCTCATGCATGTTTTAGTGCGTAAT
AAGGAGAGTATTTTATCTGCATATACCGAGTTCGAGTTTAAAAAACGGATTAGTTATTTTTCTGATATTTTGATTGGGAA
ATATCACAATAATAAAGTGAGCGTAGGGTTATCTTACATGACTAATTTTGCTTACGGGAAGCTTTACAGCGACATTGCTT
ACGCGAATGGGTTGAGATGGTTTGGGGCGAATTATTCAGCATATGATGCAAATCGTGAAAAAACCTTAAAATTATTGTCA
GGAAGTATTAATTGGCAGCGTCCAATATCCCTGTTTGAACGTGCGATGAATTATCAATTACGTATTGGTGCCCAATATGG
TTTTGATAGTTTGTATTCTGAAAATCAATTTTCAATTGGTGATGAATATACAGTAAGAGGATTTAAAGGTGGTGCGGTTT
CTGGTGATAGTGGTGCGTATTTATCACAAACACTGACGGTTCCTTTTTATCCACAAAAAGCATATTTATCTCAGGTATCC
CCTTTTATTGGATTTGATATGGGTAAAGTACATATTAAATCAAAGCATAAAACAGCCACTTTAGTCGGTTTTGCCCTAGG
CTTGAAAACGCAAATAAAGTTATTTTCATTATCATTAACCTATGCACAACCAATGAATGGTGTGAGTGGTGTTACGCAAC
ATCGTCAAAAACCGATTTATTATTTCTCAGGATCACTTTCTTTTTAA

Upstream 100 bases:

>100_bases
AACATTCTCTTTTCCTGATTCCGAATCCACGAGTAAACATAAAATCACCAGCATATCGGTCGACCTTGCGGGTGAAAAGG
TATCTCTAAATTTTGGCGAT

Downstream 100 bases:

>100_bases
TCTCTTTTAAGTTTAAGGATTAACTTAATATGAACAAAAATCGTTACAAACTCATTTTTAGTCAAGTCAAAGGTTGTCTC
GTTCCTGTGGCAGAATGTAT

Product: LspB

Products: NA

Alternate protein names: TpsB transporter [H]

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MIHAYQNQPLSTKVVFQLVKDLTEVLYRSGYVTSAIGLKNSKISNGDLEFIVLWGRTRDLLVNGEKPTRFRDKTMLSVLP
NLIGNRLSIHDIDQLIEILNTTNKKATVNVVASEEKGSSNLNIERQYDVFPQVSLGFNNSGVENNANGRNQVTLNVAWSD
LLGTNDRWNFSSSYRLYKDRHANQQRNYALSYSQPIGFSTVEVKASESSYEKELRGITVNSSNGKTRNLAVKLMHVLVRN
KESILSAYTEFEFKKRISYFSDILIGKYHNNKVSVGLSYMTNFAYGKLYSDIAYANGLRWFGANYSAYDANREKTLKLLS
GSINWQRPISLFERAMNYQLRIGAQYGFDSLYSENQFSIGDEYTVRGFKGGAVSGDSGAYLSQTLTVPFYPQKAYLSQVS
PFIGFDMGKVHIKSKHKTATLVGFALGLKTQIKLFSLSLTYAQPMNGVSGVTQHRQKPIYYFSGSLSF

Sequences:

>Translated_468_residues
MIHAYQNQPLSTKVVFQLVKDLTEVLYRSGYVTSAIGLKNSKISNGDLEFIVLWGRTRDLLVNGEKPTRFRDKTMLSVLP
NLIGNRLSIHDIDQLIEILNTTNKKATVNVVASEEKGSSNLNIERQYDVFPQVSLGFNNSGVENNANGRNQVTLNVAWSD
LLGTNDRWNFSSSYRLYKDRHANQQRNYALSYSQPIGFSTVEVKASESSYEKELRGITVNSSNGKTRNLAVKLMHVLVRN
KESILSAYTEFEFKKRISYFSDILIGKYHNNKVSVGLSYMTNFAYGKLYSDIAYANGLRWFGANYSAYDANREKTLKLLS
GSINWQRPISLFERAMNYQLRIGAQYGFDSLYSENQFSIGDEYTVRGFKGGAVSGDSGAYLSQTLTVPFYPQKAYLSQVS
PFIGFDMGKVHIKSKHKTATLVGFALGLKTQIKLFSLSLTYAQPMNGVSGVTQHRQKPIYYFSGSLSF
>Mature_468_residues
MIHAYQNQPLSTKVVFQLVKDLTEVLYRSGYVTSAIGLKNSKISNGDLEFIVLWGRTRDLLVNGEKPTRFRDKTMLSVLP
NLIGNRLSIHDIDQLIEILNTTNKKATVNVVASEEKGSSNLNIERQYDVFPQVSLGFNNSGVENNANGRNQVTLNVAWSD
LLGTNDRWNFSSSYRLYKDRHANQQRNYALSYSQPIGFSTVEVKASESSYEKELRGITVNSSNGKTRNLAVKLMHVLVRN
KESILSAYTEFEFKKRISYFSDILIGKYHNNKVSVGLSYMTNFAYGKLYSDIAYANGLRWFGANYSAYDANREKTLKLLS
GSINWQRPISLFERAMNYQLRIGAQYGFDSLYSENQFSIGDEYTVRGFKGGAVSGDSGAYLSQTLTVPFYPQKAYLSQVS
PFIGFDMGKVHIKSKHKTATLVGFALGLKTQIKLFSLSLTYAQPMNGVSGVTQHRQKPIYYFSGSLSF

Specific function: Possible member (with ibpA) of a two partner secretion pathway (TPS) in which it would mediate the secretion of protein ibpA (high molecular weight immunoglobulin-binding protein) [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005565
- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2; PF03865 ShlB [H]

EC number: NA

Molecular weight: Translated: 52736; Mature: 52736

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHAYQNQPLSTKVVFQLVKDLTEVLYRSGYVTSAIGLKNSKISNGDLEFIVLWGRTRDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCEEE
LVNGEKPTRFRDKTMLSVLPNLIGNRLSIHDIDQLIEILNTTNKKATVNVVASEEKGSSN
EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
LNIERQYDVFPQVSLGFNNSGVENNANGRNQVTLNVAWSDLLGTNDRWNFSSSYRLYKDR
CCEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCEEHHHH
HANQQRNYALSYSQPIGFSTVEVKASESSYEKELRGITVNSSNGKTRNLAVKLMHVLVRN
CCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHC
KESILSAYTEFEFKKRISYFSDILIGKYHNNKVSVGLSYMTNFAYGKLYSDIAYANGLRW
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEE
FGANYSAYDANREKTLKLLSGSINWQRPISLFERAMNYQLRIGAQYGFDSLYSENQFSIG
ECCCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCCC
DEYTVRGFKGGAVSGDSGAYLSQTLTVPFYPQKAYLSQVSPFIGFDMGKVHIKSKHKTAT
CCEEEEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCHHHCCCCCEEEEECCCCEEE
LVGFALGLKTQIKLFSLSLTYAQPMNGVSGVTQHRQKPIYYFSGSLSF
EEHHHHCCCEEEEEEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MIHAYQNQPLSTKVVFQLVKDLTEVLYRSGYVTSAIGLKNSKISNGDLEFIVLWGRTRDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCEEE
LVNGEKPTRFRDKTMLSVLPNLIGNRLSIHDIDQLIEILNTTNKKATVNVVASEEKGSSN
EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
LNIERQYDVFPQVSLGFNNSGVENNANGRNQVTLNVAWSDLLGTNDRWNFSSSYRLYKDR
CCEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCEEHHHH
HANQQRNYALSYSQPIGFSTVEVKASESSYEKELRGITVNSSNGKTRNLAVKLMHVLVRN
CCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHC
KESILSAYTEFEFKKRISYFSDILIGKYHNNKVSVGLSYMTNFAYGKLYSDIAYANGLRW
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEE
FGANYSAYDANREKTLKLLSGSINWQRPISLFERAMNYQLRIGAQYGFDSLYSENQFSIG
ECCCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCCC
DEYTVRGFKGGAVSGDSGAYLSQTLTVPFYPQKAYLSQVSPFIGFDMGKVHIKSKHKTAT
CCEEEEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCHHHCCCCCEEEEECCCCEEE
LVGFALGLKTQIKLFSLSLTYAQPMNGVSGVTQHRQKPIYYFSGSLSF
EEHHHHCCCEEEEEEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA