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The map label for this gene is yafJ [C]

Identifier: 15601903

GI number: 15601903

Start: 38776

End: 39603

Strand: Reverse

Name: yafJ [C]

Synonym: PM0038

Alternate gene names: 15601903

Gene position: 39603-38776 (Counterclockwise)

Preceding gene: 15601904

Following gene: 15601902

Centisome position: 1.75

GC content: 41.3

Gene sequence:

>828_bases
ATGTGTCAATTACTAGGAATGAATTGTAATACGCCAACGGATATTGTTTTTTCTTTTGAAGGATTTCGTCGTCGCGCGGG
TTTAACGGATTGTCATTGTGATGGATTTGGCATCGCATTTTTTGAAGGGAAAGGGATTCGAGTCTTCCGCGATAACCAAG
CCGCTCATTCTTCTCCCATTGCTGATTGTGTTAAGCAGTATCATATTAAATCACTCAATGTCATCGCCCATATTCGTAAA
GCCACACAAGGTGAAGTGAATATTGAAAATACTCACCCATTTATCCGTGAGTTATGGGGGCAAAACTGGGTCTTTGCCCA
CAACGGCAACTTAACCGTTTATCCTGATCTGACCCATTCGCTTTATCAGCCGATTGGTAGCACTGATTCTGAAGCGGCAT
TTTGTTATATGATGAGTGAACTCAAAACACGCTTTGCACAAAAACCCAGTGAAGATGAATTATTCACTTCGATGCAAGAT
ATTACGCATTCCCTTTGTCAAACAGGCACATTTAACTTTATTTTATCCAACGGCGAATGGATGATTGCACATTGCACAAC
TCACCTCCATTACCTCACCCGAAAAGCGCCTTTTGGTAAAGCACAGCGCATTGATGATGACGGTGTCATTGATTTTAATG
ATTATGCGAAAGAAGGAGATCGTGTCACCATTATTACGACCTTCCCACTCACAAAAGATGAAATTTGGACCAAAATGGAA
TGTGGGGGCTTTGTCTTTTTCAAAGAAGGCGAAAAAATCGCAGAAATTATAGGTGTACCTACTCAAGCGATTGACGACGG
TACACTGGGCTATCAAAAATGTGCATAA

Upstream 100 bases:

>100_bases
ACTTTTTTATCTAATAAGATTTTGTTTTTTTATGTTGAAAATTTCTACATTATAGTGTTAAATCGGCATATTTTATAAGG
TTATTTAACGTCGTGTTTTT

Downstream 100 bases:

>100_bases
AATCTGTCCACTGACAGCGGTCATACAAGCGTGAGCTCATCTCCTCACGCTTTTCTTTTGCCTAAATTTTATGCTGCAAA
ATGTTAATCAATAGTTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHCDGFGIAFFEGKGIRVFRDNQAAHSSPIADCVKQYHIKSLNVIAHIRK
ATQGEVNIENTHPFIRELWGQNWVFAHNGNLTVYPDLTHSLYQPIGSTDSEAAFCYMMSELKTRFAQKPSEDELFTSMQD
ITHSLCQTGTFNFILSNGEWMIAHCTTHLHYLTRKAPFGKAQRIDDDGVIDFNDYAKEGDRVTIITTFPLTKDEIWTKME
CGGFVFFKEGEKIAEIIGVPTQAIDDGTLGYQKCA

Sequences:

>Translated_275_residues
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHCDGFGIAFFEGKGIRVFRDNQAAHSSPIADCVKQYHIKSLNVIAHIRK
ATQGEVNIENTHPFIRELWGQNWVFAHNGNLTVYPDLTHSLYQPIGSTDSEAAFCYMMSELKTRFAQKPSEDELFTSMQD
ITHSLCQTGTFNFILSNGEWMIAHCTTHLHYLTRKAPFGKAQRIDDDGVIDFNDYAKEGDRVTIITTFPLTKDEIWTKME
CGGFVFFKEGEKIAEIIGVPTQAIDDGTLGYQKCA
>Mature_275_residues
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHCDGFGIAFFEGKGIRVFRDNQAAHSSPIADCVKQYHIKSLNVIAHIRK
ATQGEVNIENTHPFIRELWGQNWVFAHNGNLTVYPDLTHSLYQPIGSTDSEAAFCYMMSELKTRFAQKPSEDELFTSMQD
ITHSLCQTGTFNFILSNGEWMIAHCTTHLHYLTRKAPFGKAQRIDDDGVIDFNDYAKEGDRVTIITTFPLTKDEIWTKME
CGGFVFFKEGEKIAEIIGVPTQAIDDGTLGYQKCA

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=255, Percent_Identity=48.6274509803922, Blast_Score=265, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 31033; Mature: 31033

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHCDGFGIAFFEGKGIRVFRDNQAAHSSPI
CCEEEECCCCCCCEEEEEECHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCHH
ADCVKQYHIKSLNVIAHIRKATQGEVNIENTHPFIRELWGQNWVFAHNGNLTVYPDLTHS
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEECCCEEEECCCHHH
LYQPIGSTDSEAAFCYMMSELKTRFAQKPSEDELFTSMQDITHSLCQTGTFNFILSNGEW
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCE
MIAHCTTHLHYLTRKAPFGKAQRIDDDGVIDFNDYAKEGDRVTIITTFPLTKDEIWTKME
EEEEHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHCCCCEEEEEEECCCCHHHHHEEEC
CGGFVFFKEGEKIAEIIGVPTQAIDDGTLGYQKCA
CCEEEEEECCCHHHHHHCCCCHHCCCCCCCHHCCC
>Mature Secondary Structure
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHCDGFGIAFFEGKGIRVFRDNQAAHSSPI
CCEEEECCCCCCCEEEEEECHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCHH
ADCVKQYHIKSLNVIAHIRKATQGEVNIENTHPFIRELWGQNWVFAHNGNLTVYPDLTHS
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEECCCEEEECCCHHH
LYQPIGSTDSEAAFCYMMSELKTRFAQKPSEDELFTSMQDITHSLCQTGTFNFILSNGEW
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCE
MIAHCTTHLHYLTRKAPFGKAQRIDDDGVIDFNDYAKEGDRVTIITTFPLTKDEIWTKME
EEEEHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHCCCCEEEEEEECCCCHHHHHEEEC
CGGFVFFKEGEKIAEIIGVPTQAIDDGTLGYQKCA
CCEEEEEECCCHHHHHHCCCCHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]