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The map label for this gene is ywkD [H]

Identifier: 15601879

GI number: 15601879

Start: 12413

End: 12817

Strand: Direct

Name: ywkD [H]

Synonym: PM0014

Alternate gene names: 15601879

Gene position: 12413-12817 (Clockwise)

Preceding gene: 15601878

Following gene: 15601880

Centisome position: 0.55

GC content: 36.3

Gene sequence:

>405_bases
ATGGGGAGTGAAATTACGTTGTCAATCGTAGGCTTTCATCATGTTGCTATCATTGCGTCTGATTATTTAAAATCGAAAGA
TTTTTATACGACCATTTTAGGTACAGAAATTATTCACGAAACTTATCGATCTGAACGAAATAGCTATAAATTGGATTTAC
GTTGTCGCGATGGTAGTCAGATTGAATTGTTTTCTTTTCCAGATTCTCCTACGCGTTTAACTTATCCTGAAGCTTGTGGT
TTACGTCACTTAGCTTTCCGAGTAGAACAACTTGATCGTTTTATTGATTTTCTACGTGATAAACATATCGAATGTGAACC
CGTTAGGGTTGATCCGATAACAGGTAAGCGTTTTACGTTTCTACGGGATCCTGATGATTTGCCTTTAGAACTCTATGAAA
TGTAA

Upstream 100 bases:

>100_bases
TGATAAAGTCGATAGTGAGTGCCTTCTTTGTTGAAACGGGAGAGGGCGCTATTTATTTTACATTGATTTTAAAATGTGTA
TAATTAGTCCTCAATTTTAG

Downstream 100 bases:

>100_bases
GAGATGAAAATATGCGTTTTAATGTATCGTTCTTATTAAGTCTGTTATTACCAACGTTGGCTTTTGCTGAGTCTTGGTCT
ATTCGTATTTCTGAGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MGSEITLSIVGFHHVAIIASDYLKSKDFYTTILGTEIIHETYRSERNSYKLDLRCRDGSQIELFSFPDSPTRLTYPEACG
LRHLAFRVEQLDRFIDFLRDKHIECEPVRVDPITGKRFTFLRDPDDLPLELYEM

Sequences:

>Translated_134_residues
MGSEITLSIVGFHHVAIIASDYLKSKDFYTTILGTEIIHETYRSERNSYKLDLRCRDGSQIELFSFPDSPTRLTYPEACG
LRHLAFRVEQLDRFIDFLRDKHIECEPVRVDPITGKRFTFLRDPDDLPLELYEM
>Mature_133_residues
GSEITLSIVGFHHVAIIASDYLKSKDFYTTILGTEIIHETYRSERNSYKLDLRCRDGSQIELFSFPDSPTRLTYPEACGL
RHLAFRVEQLDRFIDFLRDKHIECEPVRVDPITGKRFTFLRDPDDLPLELYEM

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=128, Percent_Identity=53.90625, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15704; Mature: 15573

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSEITLSIVGFHHVAIIASDYLKSKDFYTTILGTEIIHETYRSERNSYKLDLRCRDGSQ
CCCEEEEEEECHHHHEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE
IELFSFPDSPTRLTYPEACGLRHLAFRVEQLDRFIDFLRDKHIECEPVRVDPITGKRFTF
EEEEECCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEE
LRDPDDLPLELYEM
EECCCCCCEEEECC
>Mature Secondary Structure 
GSEITLSIVGFHHVAIIASDYLKSKDFYTTILGTEIIHETYRSERNSYKLDLRCRDGSQ
CCEEEEEEECHHHHEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE
IELFSFPDSPTRLTYPEACGLRHLAFRVEQLDRFIDFLRDKHIECEPVRVDPITGKRFTF
EEEEECCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEE
LRDPDDLPLELYEM
EECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]