Click here to switch to the map view.

The map label for this gene is rne

Identifier: 15598172

GI number:

Start: 3332881

End: 3336054

Strand: Direct

Name: rne

Synonym: PA2976

Alternate gene names: NA

Gene position: NA

Preceding gene: 15598168

Following gene: 15598181

Centisome position: NA

GC content: NA

Gene sequence:

>3174_bases
ATGAAAAGAATGCTGATCAACGCGACTCAACCCGAGGAGTTGCGTGTTGCACTGGTCGACGGCCAACGCCTGTTCGACCT
CGACATCGAGTCGGGCGCCCGCGAGCAGAAGAAGGCCAACATCTACAAAGGCCGCATCACTCGCGTCGAACCCAGCCTCG
AAGCCGCCTTCGTCGACTTCGGCGCCGAACGCCACGGCTTCCTCCCCCTCAAAGAAATCTCCCGCGAATACTTCAAGAAA
TCCCCCGAAGGCCGGATCAACATCAAGGAAGTCCTGAGCGAAGGCCAGGAAGTCATCGTCCAGGTCGAGAAGGAAGAGCG
CGGCAACAAGGGCGCCGCCCTGACCACCTTCATCAGCCTGGCCGGCCGTTACCTGGTGCTGATGCCGAACAACCCGCGCG
CCGGCGGCATCTCCCGCCGTATCGAAGGCGAAGAGCGCAACGAGCTGCGCGAGGCCCTGAACGGCCTCAACGCACCGGCC
GACATGGGCCTGATCGTGCGCACCGCCGGCCTCGGCCGCAGCACCGAGGAACTGCAGTGGGACCTCGACTACCTGCTGCA
ACTGTGGAGCGCGATCAAGGAAGCGTCCGGCGAACGTGGCGCGCCCTTCCTGATCTACCAGGAAAGCAACGTCATCATCC
GCGCCATCCGCGACTACCTGCGCCAGGACATCGGCGAAGTGCTGATCGACAGCATCGACGCCCAGGAAGAAGCCCTGAAC
TTCATCCGCCAGGTGATGCCGCAGTACGCCAGCAAGGTGAAGCTGTACCAGGACAGCGTTCCGCTGTTCAATCGCTTCCA
GATCGAGAGCCAGATCGAGACCGCTTTCCAGCGCGAAGTGAAGCTGCCGTCCGGCGGCTCCATCGTCATCGACCCGACCG
AGGCCCTGGTTTCCATCGACATCAACTCGGCGCGCGCCACCAAGGGCGGCGACATCGAGGAAACCGCCCTGCAGACCAAC
CTGGAAGCGGCCGAGGAAATCGCCCGCCAGCTGCGCCTGCGTGACATCGGCGGCCTGATCGTCATCGACTTCATCGACAT
GACCCCGGCGAAGAACCAGCGCGCCGTGGAAGAGCGTGTCCGCGAAGCCCTCGAGGCCGACCGCGCGCGCGTCCAGGTCG
GTCGCATCTCGCGCTTCGGCCTGCTGGAAATGTCCCGCCAGCGCCTGCGTCCGTCCCTCGGCGAGACCAGCGGCATCGTC
TGCCCGCGCTGCAACGGCCAGGGCATCATCCGCGACGTCGAGTCGCTGTCGCTGGCCATCCTGCGCCTGATCGAGGAAGA
AGCCCTGAAGGACCGCACCGCGGAAGTCCGCGCCCGCGTGCCCTTCCAGGTCGCCGCCTTCCTGCTCAACGAGAAGCGCA
ACGCCATCACCAAGATCGAACTGCGTACCCGCGCGCGCATCTTCATCCTGCCGGACGATCATCTGGAAACCCCGCATTTC
GAAGTCCAGCGTCTGCGCGATGACAGCCCCGAACTGGTTGCCGGCCAGACCAGCTACGAAATGGCCACCGTCGAGCACGA
AGAAGCCCAGCCGGTCAGCTCGACCCGCACCCTGGTCCGCCAGGAAGCAGCAGTCAAGACCGTCGCTCCCCAGCAGCCCG
CACCGCAACACACCGAAGCACCGGTCGAGCCGGCCAAGCCGATGCCCGAGCCGAGCCTGTTCCAGGGCCTGGTGAAGTCC
CTGGTCGGCCTGTTCGCAGGCAAGGATCAACCTGCCGCCAAGCCTGCTGAAACCAGCAAGCCGGCTGCCGAGCGCCAAAC
CCGCCAGGACGAGCGTCGCAACGGCCGCCAGCAGAACCGCCGCCGCGATGGCCGCGATGGCAATCGCCGCGACGAAGAGC
GCAAACCGCGCGAGGAGCGTGCAGAGCGTCAACCGCGCGAAGAGCGCGCCGAACGCCCGAACCGCGAAGAGCGCAGCGAA
CGTCGCCGCGAAGAGCGCGCCGAGCGCCCGGCTCGCGAGGAGCGCCAGCCGCGCGAAGGCCGTGAAGAGCGCGCCGAGCG
GACACCCCGCGAAGAGCGCCAGCCGCGCGAAGGCCGCGAAGGTCGCGAGGAACGCAGCGAACGCCGCCGCGAAGAGCGCG
CCGAACGCCCGGCCCGCGAAGAGCGCCAACCCCGCGAAGGCCGTGAAGAACGCGCCGAGCGCCCGGCCCGCGAAGAGCGC
CAGCCGCGCGAGGATCGCCAGGCTCGCGACGCCGCGGCCCTGGAAGCCGAGGCATTGCCGAACGACGAGAGCCTGGAGCA
GGACGAGCAGGACGATACCGATGGCGAGCGCCCGCGCCGCCGCTCCCGCGGCCAGCGTCGTCGCAGCAACCGCCGCGAAC
GCCAGCGCGAGGTCAGCGGCGAGCTGGAAGGCAGCGAGGCGACCGATAACGCCGCCGCGCCGCTGAACACCGTCGCAGCC
GCCGCCGCTGCCGGTATCGCTGTCGCCAGCGAAGCCGTAGAAGCAAACGTGGAGCAAGCCCCGGCCACTACCAGCGAGGC
TGCCAGCGAAACCACGGCAAGCGATGAGACCGACGCGTCGACCAGCGAAGCCGTCGAAACCCAGGGCGCGGACAGCGAGG
CCAATACCGGCGAAACCGCCGACATCGAAGCGCCGGTGACCGTCAGCGTGGTCCGGGACGAAGCCGACCAGAGCACCCTG
CTGGTCGCGCAAGCCACTGAAGAAGCTCCCTTCGCCAGCGAAAGCGTGGAAAGCCGCGAAGACGCCGAGAGCGCCGTGCA
ACCGGCAACGGAAGCGGCCGAAGAAGTTGCCGCTCCGGTGCCCGTCGAAGTAGCAGCCCCTAGCGAGCCCGCAGCCACCG
AGGAGCCGACCCCGGCCATCGCGGCGGTGCCGGCCAACGCGACTGGCCGTGCCCTCAACGACCCACGGGAAAAACGTCGC
CTGCAACGCGAAGCCGAGCGTCTGGCACGCGAAGCCGCAGCAGCAGCCGAAGCGGCAGCTCAGGCCGCTCCCGCCGTCGA
GGAGATCCCGGCTGTAGCGAGCGAGGAAGCGTCGGCCCAGGAGGAACCTGCTGCACCCCAGGCTGAAGAAATCACCCAGG
CCGACGTTCCGTCCCAGGCGGACGAAGCCCAGGAAGCGGTACAGGCCGAGCCTGAAGCTTCCGGCGAAGGCGCCGCCGAC
ACGGAGCACGCGAAAAAGACCGAGGAAAGCGAAACCTCGCGCCCGCATGCCTGA

Upstream 100 bases:

>100_bases
GGAATGGCCCGCCATTCCTGAATACGCGCCCGAGCACCGACCGTGAGAGTCGTGTGTGCCGATCGCCGTTTCCGGTAGCC
CCGGAAACCATTGGTACTAC

Downstream 100 bases:

>100_bases
GTGACAGGCTGAAAAAAGGGGATGCCATGGCATCCCCTTTTTTTGCGCGCCATTCCGCGGCACTCCGGCATACCGCCCGT
CATGACCAGAGCCGCCGAAC

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1057_residues
MKRMLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGRITRVEPSLEAAFVDFGAERHGFLPLKEISREYFKK
SPEGRINIKEVLSEGQEVIVQVEKEERGNKGAALTTFISLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLNAPA
DMGLIVRTAGLGRSTEELQWDLDYLLQLWSAIKEASGERGAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALN
FIRQVMPQYASKVKLYQDSVPLFNRFQIESQIETAFQREVKLPSGGSIVIDPTEALVSIDINSARATKGGDIEETALQTN
LEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERVREALEADRARVQVGRISRFGLLEMSRQRLRPSLGETSGIV
CPRCNGQGIIRDVESLSLAILRLIEEEALKDRTAEVRARVPFQVAAFLLNEKRNAITKIELRTRARIFILPDDHLETPHF
EVQRLRDDSPELVAGQTSYEMATVEHEEAQPVSSTRTLVRQEAAVKTVAPQQPAPQHTEAPVEPAKPMPEPSLFQGLVKS
LVGLFAGKDQPAAKPAETSKPAAERQTRQDERRNGRQQNRRRDGRDGNRRDEERKPREERAERQPREERAERPNREERSE
RRREERAERPAREERQPREGREERAERTPREERQPREGREGREERSERRREERAERPAREERQPREGREERAERPAREER
QPREDRQARDAAALEAEALPNDESLEQDEQDDTDGERPRRRSRGQRRRSNRRERQREVSGELEGSEATDNAAAPLNTVAA
AAAAGIAVASEAVEANVEQAPATTSEAASETTASDETDASTSEAVETQGADSEANTGETADIEAPVTVSVVRDEADQSTL
LVAQATEEAPFASESVESREDAESAVQPATEAAEEVAAPVPVEVAAPSEPAATEEPTPAIAAVPANATGRALNDPREKRR
LQREAERLAREAAAAAEAAAQAAPAVEEIPAVASEEASAQEEPAAPQAEEITQADVPSQADEAQEAVQAEPEASGEGAAD
TEHAKKTEESETSRPHA

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA