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The map label for this gene is tmk [H]

Identifier: 15595138

GI number: 15595138

Start: 830955

End: 831728

Strand: Reverse

Name: tmk [H]

Synonym: BB0793

Alternate gene names: 15595138

Gene position: 831728-830955 (Counterclockwise)

Preceding gene: 15595157

Following gene: 15595137

Centisome position: 91.33

GC content: 24.16

Gene sequence:

>774_bases
ATGGAAAAAATTATTAAAACAAAAATAAAAAATGGCAAAATCAACAATATAAATGTCTTACTTCTCAAAAACAACAAATT
CATACACTCTATCGATAATTATTATTATATAATAATTATCGATAACCTAATTATTGACACCAAAAGAAAGGAAGAAAAAA
TATTTGTGATTAAAATATTGAAAAACTTTTATTGCATAGAAGGAATTGATGGAAGCGGGAAAACAAGCATCACTAATAAA
CTAAAAGCTCTTTGCAACGATGAATCAAGGTATTATTTTACAAAAGAACCATCAAGTGGAATAATTGGAGAAATGATAAG
AAAGCAATTAATGAATTTTGAAAATCCTTTAGAAGAATCAACATTTGCATATCTTTATGCTGCAGACCGACACGATCATT
TATATAAAAAAGGTGGAATACTGGAAATTTTAAACACAAAATCTAGAAAAATAATAACTGATCGCTATTTATTCTCATCG
ATTGCATATCAAGGAAAATTAGGATATGAATTAAATAAAAATTTCCCATTGCCTGAAAAAGTATTCTTTATCGAAACAGA
CCCAAACATAGCTTATGAAAGAATACAGAAAAATAGAACACAAAGTGATCTTTTTGAACTTGAAAAATATAAAACTTTTG
AACAAATTGCTCTAAAATATTTAAAAATATTTAAAAAACTAGAAAAAAAAATTAATGTGATTTACATCAACAATTCAATA
AAAGATAATTTAGATAAAAACGCAAAAAAAATTTTCAATCTAATAAAATTCTAA

Upstream 100 bases:

>100_bases
TGAAATTTTATCATATTTAATCTTAAAGCCAAATTTTGATTCAAGATATTTTATAGCAAAAAACTTTGCAGAATAAATTT
GAGCTTGAACAAATAGATTA

Downstream 100 bases:

>100_bases
TATAATTAATCATATGCATATTTTCAAAAATGTCCCCTTCCAAATAAATTTAATTTTATTTCTTTTAGTATCAGTTGCAA
AGATAAATGCATCGTCCAAA

Product: thymidylate kinase

Products: NA

Alternate protein names: dTMP kinase [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEKIIKTKIKNGKINNINVLLLKNNKFIHSIDNYYYIIIIDNLIIDTKRKEEKIFVIKILKNFYCIEGIDGSGKTSITNK
LKALCNDESRYYFTKEPSSGIIGEMIRKQLMNFENPLEESTFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSS
IAYQGKLGYELNKNFPLPEKVFFIETDPNIAYERIQKNRTQSDLFELEKYKTFEQIALKYLKIFKKLEKKINVIYINNSI
KDNLDKNAKKIFNLIKF

Sequences:

>Translated_257_residues
MEKIIKTKIKNGKINNINVLLLKNNKFIHSIDNYYYIIIIDNLIIDTKRKEEKIFVIKILKNFYCIEGIDGSGKTSITNK
LKALCNDESRYYFTKEPSSGIIGEMIRKQLMNFENPLEESTFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSS
IAYQGKLGYELNKNFPLPEKVFFIETDPNIAYERIQKNRTQSDLFELEKYKTFEQIALKYLKIFKKLEKKINVIYINNSI
KDNLDKNAKKIFNLIKF
>Mature_257_residues
MEKIIKTKIKNGKINNINVLLLKNNKFIHSIDNYYYIIIIDNLIIDTKRKEEKIFVIKILKNFYCIEGIDGSGKTSITNK
LKALCNDESRYYFTKEPSSGIIGEMIRKQLMNFENPLEESTFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSS
IAYQGKLGYELNKNFPLPEKVFFIETDPNIAYERIQKNRTQSDLFELEKYKTFEQIALKYLKIFKKLEKKINVIYINNSI
KDNLDKNAKKIFNLIKF

Specific function: Unknown

COG id: COG0125

COG function: function code F; Thymidylate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidylate kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018095
- InterPro:   IPR018094 [H]

Pfam domain/function: PF02223 Thymidylate_kin [H]

EC number: =2.7.4.9 [H]

Molecular weight: Translated: 30376; Mature: 30376

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS01331 THYMIDYLATE_KINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIIKTKIKNGKINNINVLLLKNNKFIHSIDNYYYIIIIDNLIIDTKRKEEKIFVIKIL
CCCHHHHHHCCCCCCCEEEEEEECCCEEEECCCEEEEEEEECEEECCCCCCCCEEEEEEH
KNFYCIEGIDGSGKTSITNKLKALCNDESRYYFTKEPSSGIIGEMIRKQLMNFENPLEES
HHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLGYELNKNFPLPEK
CEEEEEEECCCCHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEECCCCCCCCE
VFFIETDPNIAYERIQKNRTQSDLFELEKYKTFEQIALKYLKIFKKLEKKINVIYINNSI
EEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCH
KDNLDKNAKKIFNLIKF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKIIKTKIKNGKINNINVLLLKNNKFIHSIDNYYYIIIIDNLIIDTKRKEEKIFVIKIL
CCCHHHHHHCCCCCCCEEEEEEECCCEEEECCCEEEEEEEECEEECCCCCCCCEEEEEEH
KNFYCIEGIDGSGKTSITNKLKALCNDESRYYFTKEPSSGIIGEMIRKQLMNFENPLEES
HHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLGYELNKNFPLPEK
CEEEEEEECCCCHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEECCCCCCCCE
VFFIETDPNIAYERIQKNRTQSDLFELEKYKTFEQIALKYLKIFKKLEKKINVIYINNSI
EEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCH
KDNLDKNAKKIFNLIKF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]