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The map label for this gene is ykpA [H]

Identifier: 15595087

GI number: 15595087

Start: 783324

End: 785021

Strand: Direct

Name: ykpA [H]

Synonym: BB0742

Alternate gene names: 15595087

Gene position: 783324-785021 (Clockwise)

Preceding gene: 15595083

Following gene: 15595088

Centisome position: 86.01

GC content: 30.92

Gene sequence:

>1698_bases
TTGAAAATTAAATTAATTTTCAAGATAATTTTGTTATTAGAATATCAATTTAGGCAGGGTAATGGTTTGATAACTGTAAG
TAATTTGGAAGTTGCATTTGGAGAGAGAGTTTTATTCAAAGATGTAAATATTAAATTTTCTCCTGGAAATTGCTATGGAA
TAATTGGTGCTAATGGGGCAGGAAAAAGCACTTTTTTAAAAGTATTAGGGGGAATGATTGAAGCTAGTAAGGGTGAAATA
TCTATCCCCAAAAATCAAAGAGTAGCAGCTCTTGAACAAGATCAATTTGCTTATGATGGATATAAGGTTATCGATACTGT
TATTATGGGTCACAAAAGACTTTATTCTGTTCAAAAAGAAAAAGATGAAATTTATAGTAAGCTTGATTTTACTGATGAGG
ATGGAATTAGAGCTGGAGAGCTTGAAGCAGAATTTTCAGAGCTTGGAGGATACGAGGCTGAATCTGATGCAGCGGTTCTT
CTTAAAGGTCTTGGAATAGATGAGGCAATTCATAATAATTTAATGGGTGATGTTGAAGGGGCTTTAAAAGTTAGGGTTCT
TTTGGCTCAAGCACTTTTTGGTGATCCCGATGTATTACTTCTTGATGAGCCTACTAATAACCTTGATCTACAATCTATTA
AATGGTTAGAAGAGTTTTTAATTAATTTTGAAAATACAGTTATTGTTGTATCTCACGATAGACATTTTTTAAATCAAGTT
TGTACTCATATTGTTGACATTGATTATGGCAAGATTCAAGTGTATCTTGGAAATTATGATTTTTGGTATGAAACAAGTCA
GATTTTAAACAAGCAACTAAAAGATGCTAAAAAGCGATCTGAAGATAAAATTGCTGAACTTAAGACATTTATTCAAAGAT
TTTCTAGTAATGCATCTAAGTCTAAGCAAGCAACATCAAGGAAAAAGTTGATTGAAAAAATAAAGGTTGAAGATTTAAAG
CCTTCTTCAAGGAAGTTCCCTTATGTTAATTTCAAAAGCGAAAGAGAACTTGGCAAGAATGTTCTTACAATTAAAAATTT
AATAAAAGAATTTGAAGGGAATTTAATTTTAAATAAATTTAGTATTATTGTTGAACCTCAGCAAAAGATTGTTTTTTTGG
GAAATCCCATGTTTGCAACTTTTTTGTTTGATATTATTACAAATGAAGATAGAAATTATAAAGGTCATTATGAATGGGGA
TCTACCGTTAATTTTTCGTATTTTAATAAAGATAATGGAAAATATTTTGATTTAGATTTAAATTTAGTCGATTGGTTACG
TCAGTATTCAAAAGAACAAGATGAAACTTATATTAGAGGATTTTTAGGTCGAATGCTTTTCAGCCAAGATGAAGCTTTAA
AAAAGGTAAATGTTCTCTCAGGGGGAGAAAAAGTAAGATGCATGCTTGCTAAGGCTATGCTTAGCGGAGCTAATGTTTTA
ATACTGGACCAACCCACAAATCACTTAGATCTTGAGGCAATTACATCTTTAAATTCCGGGCTTAAAGAGTTTAAAGGAGT
TGTTCTTTTTACATCACATGATCATCAATTTATAGATACTGTTGCTAATAGGATTATAGAGTTTACTCCTAACGGAATAA
TTGATCGATATATGACTTTTTCTGAGTATGTTGATGATGCTAAGATTAGGGATCTGAGAAATAATCTTTATGGCAATAAT
GCTGGTTTTAGGCTTTAG

Upstream 100 bases:

>100_bases
CAGCTAACGGCTTAATATTTTTCATCTCAAACATCTCCTTATATAATAATATTAAATATACGAAAAAACTGAGAGTTGAG
TCAATATATTTATATGGTGC

Downstream 100 bases:

>100_bases
TAGCAGTTTTTTAGAAACTCAAAAGGTTTTTTATTTTGAGAGGTCTACTTTTCATATTTGTGTTTTCAGCTTCTTTTTTA
AGGCTTTATTCTGATATTAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKIKLIFKIILLLEYQFRQGNGLITVSNLEVAFGERVLFKDVNIKFSPGNCYGIIGANGAGKSTFLKVLGGMIEASKGEI
SIPKNQRVAALEQDQFAYDGYKVIDTVIMGHKRLYSVQKEKDEIYSKLDFTDEDGIRAGELEAEFSELGGYEAESDAAVL
LKGLGIDEAIHNNLMGDVEGALKVRVLLAQALFGDPDVLLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQV
CTHIVDIDYGKIQVYLGNYDFWYETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSKQATSRKKLIEKIKVEDLK
PSSRKFPYVNFKSERELGKNVLTIKNLIKEFEGNLILNKFSIIVEPQQKIVFLGNPMFATFLFDIITNEDRNYKGHYEWG
STVNFSYFNKDNGKYFDLDLNLVDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVL
ILDQPTNHLDLEAITSLNSGLKEFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDAKIRDLRNNLYGNN
AGFRL

Sequences:

>Translated_565_residues
MKIKLIFKIILLLEYQFRQGNGLITVSNLEVAFGERVLFKDVNIKFSPGNCYGIIGANGAGKSTFLKVLGGMIEASKGEI
SIPKNQRVAALEQDQFAYDGYKVIDTVIMGHKRLYSVQKEKDEIYSKLDFTDEDGIRAGELEAEFSELGGYEAESDAAVL
LKGLGIDEAIHNNLMGDVEGALKVRVLLAQALFGDPDVLLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQV
CTHIVDIDYGKIQVYLGNYDFWYETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSKQATSRKKLIEKIKVEDLK
PSSRKFPYVNFKSERELGKNVLTIKNLIKEFEGNLILNKFSIIVEPQQKIVFLGNPMFATFLFDIITNEDRNYKGHYEWG
STVNFSYFNKDNGKYFDLDLNLVDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVL
ILDQPTNHLDLEAITSLNSGLKEFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDAKIRDLRNNLYGNN
AGFRL
>Mature_565_residues
MKIKLIFKIILLLEYQFRQGNGLITVSNLEVAFGERVLFKDVNIKFSPGNCYGIIGANGAGKSTFLKVLGGMIEASKGEI
SIPKNQRVAALEQDQFAYDGYKVIDTVIMGHKRLYSVQKEKDEIYSKLDFTDEDGIRAGELEAEFSELGGYEAESDAAVL
LKGLGIDEAIHNNLMGDVEGALKVRVLLAQALFGDPDVLLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQV
CTHIVDIDYGKIQVYLGNYDFWYETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSKQATSRKKLIEKIKVEDLK
PSSRKFPYVNFKSERELGKNVLTIKNLIKEFEGNLILNKFSIIVEPQQKIVFLGNPMFATFLFDIITNEDRNYKGHYEWG
STVNFSYFNKDNGKYFDLDLNLVDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVL
ILDQPTNHLDLEAITSLNSGLKEFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDAKIRDLRNNLYGNN
AGFRL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=29.1588785046729, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI27881506, Length=509, Percent_Identity=29.8624754420432, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI10947137, Length=509, Percent_Identity=29.8624754420432, Blast_Score=216, Evalue=6e-56,
Organism=Homo sapiens, GI69354671, Length=515, Percent_Identity=28.1553398058252, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI10947135, Length=515, Percent_Identity=28.1553398058252, Blast_Score=167, Evalue=3e-41,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=44.4866920152091, Blast_Score=490, Evalue=1e-139,
Organism=Escherichia coli, GI1789751, Length=505, Percent_Identity=29.3069306930693, Blast_Score=238, Evalue=7e-64,
Organism=Escherichia coli, GI2367384, Length=531, Percent_Identity=29.7551789077213, Blast_Score=214, Evalue=2e-56,
Organism=Escherichia coli, GI1787182, Length=526, Percent_Identity=29.0874524714829, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=25.4310344827586, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=25.2100840336134, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788644, Length=236, Percent_Identity=28.8135593220339, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=277, Percent_Identity=23.826714801444, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=25.6302521008403, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786703, Length=239, Percent_Identity=26.7782426778243, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=20.353982300885, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788506, Length=265, Percent_Identity=23.0188679245283, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=522, Percent_Identity=29.3103448275862, Blast_Score=209, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=527, Percent_Identity=26.1859582542694, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17555318, Length=548, Percent_Identity=26.4598540145985, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17558664, Length=221, Percent_Identity=27.6018099547511, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=557, Percent_Identity=31.2387791741472, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6320874, Length=520, Percent_Identity=32.5, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6325030, Length=239, Percent_Identity=29.7071129707113, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=228, Percent_Identity=27.1929824561404, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6323278, Length=232, Percent_Identity=27.5862068965517, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24666836, Length=519, Percent_Identity=31.9845857418112, Blast_Score=245, Evalue=8e-65,
Organism=Drosophila melanogaster, GI24642252, Length=519, Percent_Identity=27.9383429672447, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI18859989, Length=519, Percent_Identity=27.9383429672447, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24641342, Length=511, Percent_Identity=29.5499021526419, Blast_Score=200, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 64392; Mature: 64392

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKLIFKIILLLEYQFRQGNGLITVSNLEVAFGERVLFKDVNIKFSPGNCYGIIGANGA
CEEHHHHHHHHHHHHHEECCCCEEEEECCEEECCCEEEEEECEEEECCCCEEEEEECCCC
GKSTFLKVLGGMIEASKGEISIPKNQRVAALEQDQFAYDGYKVIDTVIMGHKRLYSVQKE
CHHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHH
KDEIYSKLDFTDEDGIRAGELEAEFSELGGYEAESDAAVLLKGLGIDEAIHNNLMGDVEG
HHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHEEECCCCHHHHHHCCCCCHHH
ALKVRVLLAQALFGDPDVLLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQV
HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
CTHIVDIDYGKIQVYLGNYDFWYETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASK
HHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SKQATSRKKLIEKIKVEDLKPSSRKFPYVNFKSERELGKNVLTIKNLIKEFEGNLILNKF
HHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHHHHHCCCEEEEEE
SIIVEPQQKIVFLGNPMFATFLFDIITNEDRNYKGHYEWGSTVNFSYFNKDNGKYFDLDL
EEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEEECCCCEEEEEEC
NLVDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEE
ILDQPTNHLDLEAITSLNSGLKEFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTF
EECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHEECCCCCHHHHHHHH
SEYVDDAKIRDLRNNLYGNNAGFRL
HHHHCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKIKLIFKIILLLEYQFRQGNGLITVSNLEVAFGERVLFKDVNIKFSPGNCYGIIGANGA
CEEHHHHHHHHHHHHHEECCCCEEEEECCEEECCCEEEEEECEEEECCCCEEEEEECCCC
GKSTFLKVLGGMIEASKGEISIPKNQRVAALEQDQFAYDGYKVIDTVIMGHKRLYSVQKE
CHHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHH
KDEIYSKLDFTDEDGIRAGELEAEFSELGGYEAESDAAVLLKGLGIDEAIHNNLMGDVEG
HHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHEEECCCCHHHHHHCCCCCHHH
ALKVRVLLAQALFGDPDVLLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQV
HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
CTHIVDIDYGKIQVYLGNYDFWYETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASK
HHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SKQATSRKKLIEKIKVEDLKPSSRKFPYVNFKSERELGKNVLTIKNLIKEFEGNLILNKF
HHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHHHHHCCCEEEEEE
SIIVEPQQKIVFLGNPMFATFLFDIITNEDRNYKGHYEWGSTVNFSYFNKDNGKYFDLDL
EEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEEECCCCEEEEEEC
NLVDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEE
ILDQPTNHLDLEAITSLNSGLKEFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTF
EECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHEECCCCCHHHHHHHH
SEYVDDAKIRDLRNNLYGNNAGFRL
HHHHCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]