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The map label for this gene is secY

Identifier: 15594843

GI number: 15594843

Start: 505554

End: 506858

Strand: Direct

Name: secY

Synonym: BB0498

Alternate gene names: 15594843

Gene position: 505554-506858 (Clockwise)

Preceding gene: 15594842

Following gene: 15594844

Centisome position: 55.51

GC content: 30.11

Gene sequence:

>1305_bases
ATGAAAGAATTGTTTTTAAGTTTATTTACCGTTAAGGATTTGAGAAATAAGTTCTTGTTTACTTTATTTGTTCTTTTTCT
TTTTAGAGTTGGTTCATATTTGCCGATACCAGGAATAGATTCTGTAGCTCTTAAAAGTTATTTCAAGTCGCAATCAGATT
TTTCAATTGCTAATTATTTTGATTTTTTTTCAGGGGGAGCTTTTAGTAATTTTTCTATATTTATGCTTAGTATAGGGCCT
TACATTTCGGCATCTATTATTGTTCAGCTTCTTGTTTATTCTTTTCCTTCTTTGAAAAAAATGCAAGAAGGTGACGGCGG
AAGACAAAAGACTAAAAAATATACAAAATATTTAACAATAGTTGCAGCTGTAGTTCAAGGATACGCAACAAGCCTTTATG
CTAAAGGTATTCCGGGTGCTGTTACCATTCCCTTTTATAGATATATATTTGTTGCTATTTTAACGGTTACTACGGGGACA
TTTATCCTTTTGTGGTTTGGAGAGCAAATTAATCAAAGAGGTGTAGGTAATGGAACATCTTTGATAATTTTTTCTGGCAT
AGTGGTTAGACTTCAAGCAGCTTTGTTTAACTTATTCCAAAGCATGCAGGATCCTTCTCAAAATGTTAATCCTGTTTTTG
TTATACTTATTATAAGTATATTTATTTTAGTTGTTATATTGATTATATATGAATATAAGGCTCAAATGCGAATTGCCATT
CATTATGCTAGAGCAAATTCTAATAATACAGTTAGTTCATATTTGCCAATCAAGTTGAATCCATCGGGCGTTTTGCCTGT
TATTTTTGCCTCTGTTTTAATTACTCTGCCTTTACAAATTTTAAGTGGCTTCGCAGAAACTTCTTCCATAGCCAGGCAAA
TTTTATCTTATTTAAGGCCTAATGGTTTTTATTATACTTTTTTGAATGTAATTTTGATAATTGGATTTACGTATTTTTAT
TCTAAGATTCAGTTAAGCCCTAAAGACATAAGTAATAATATTCGTAAGAATGGGGGCACTATTCCAGGAATAAAGTCTGA
TGAGATGGAAAAATATTTAGATGAAATTATGAATAAAACTTTATTTTCAGGATCTATTTTTTTGTCAATTATTGCAATTA
TTCCATTTTTAGTGCAAAATATTTTTAGATTTCCACACGATGTTTCTAGAATAATGGGGGGGTCTTCTTTGCTTATTATG
GTAGGGGTTGCTCTTGATACATTAATTCATATTGATGCTTATTTGAAAACTCAAGGATTTTCTCATGGAAATAAAAAGAA
TTATGCATTTTTGCAAAAAATTTAG

Upstream 100 bases:

>100_bases
AAAAAAAGTTTCTTTTGAGGTTTCTAAAATTTCTAAATCTGCCGAAAGCCTTGTAATAAAAATTGGTTGTACTATTCAAT
TAGTTTAAAGTGGAATAAAG

Downstream 100 bases:

>100_bases
GAGTGTTTGATTATGAAAGTTAGAGTAAGTGTAAAGCCAATTTGTGAAAAATGTAAGGTTATAAAAAGAAAAGGTGTATT
AAGAATTATTTGTGATAATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKELFLSLFTVKDLRNKFLFTLFVLFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGP
YISASIIVQLLVYSFPSLKKMQEGDGGRQKTKKYTKYLTIVAAVVQGYATSLYAKGIPGAVTIPFYRYIFVAILTVTTGT
FILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPVFVILIISIFILVVILIIYEYKAQMRIAI
HYARANSNNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQILSYLRPNGFYYTFLNVILIIGFTYFY
SKIQLSPKDISNNIRKNGGTIPGIKSDEMEKYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
VGVALDTLIHIDAYLKTQGFSHGNKKNYAFLQKI

Sequences:

>Translated_434_residues
MKELFLSLFTVKDLRNKFLFTLFVLFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGP
YISASIIVQLLVYSFPSLKKMQEGDGGRQKTKKYTKYLTIVAAVVQGYATSLYAKGIPGAVTIPFYRYIFVAILTVTTGT
FILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPVFVILIISIFILVVILIIYEYKAQMRIAI
HYARANSNNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQILSYLRPNGFYYTFLNVILIIGFTYFY
SKIQLSPKDISNNIRKNGGTIPGIKSDEMEKYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
VGVALDTLIHIDAYLKTQGFSHGNKKNYAFLQKI
>Mature_434_residues
MKELFLSLFTVKDLRNKFLFTLFVLFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGP
YISASIIVQLLVYSFPSLKKMQEGDGGRQKTKKYTKYLTIVAAVVQGYATSLYAKGIPGAVTIPFYRYIFVAILTVTTGT
FILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPVFVILIISIFILVVILIIYEYKAQMRIAI
HYARANSNNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQILSYLRPNGFYYTFLNVILIIGFTYFY
SKIQLSPKDISNNIRKNGGTIPGIKSDEMEKYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
VGVALDTLIHIDAYLKTQGFSHGNKKNYAFLQKI

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=35.7647058823529, Blast_Score=233, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECY_BORBU (O51451)

Other databases:

- EMBL:   AE000783
- PIR:   A70162
- RefSeq:   NP_212632.1
- ProteinModelPortal:   O51451
- EnsemblBacteria:   EBBORT00000008526
- GeneID:   1195344
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0498
- NMPDR:   fig|224326.1.peg.882
- TIGR:   BB_0498
- GeneTree:   EBGT00050000007014
- HOGENOM:   HBG565931
- OMA:   IQTYVIS
- ProtClustDB:   PRK09204
- BioCyc:   BBUR224326:BB_0498-MONOMER
- InterPro:   IPR002208
- InterPro:   IPR023201
- PANTHER:   PTHR10906
- PIRSF:   PIRSF004557
- PRINTS:   PR00303
- TIGRFAMs:   TIGR00967

Pfam domain/function: PF00344 SecY; SSF103491 SecY

EC number: NA

Molecular weight: Translated: 48611; Mature: 48611

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00755 SECY_1; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc1c9590)-; HASH(0xc7fd5ec)-; HASH(0xc4ab508)-; HASH(0xc6967c8)-; HASH(0xc1b70c0)-; HASH(0xc1bcc00)-; HASH(0xc8c4558)-; HASH(0xc8751f0)-; HASH(0xc08a738)-; HASH(0xc908c70)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHHHCH
>Mature Secondary Structure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CCCCCCCCHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685