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The map label for this gene is rpmD [H]

Identifier: 15594841

GI number: 15594841

Start: 504799

End: 505104

Strand: Direct

Name: rpmD [H]

Synonym: BB0496

Alternate gene names: 15594841

Gene position: 504799-505104 (Clockwise)

Preceding gene: 15594840

Following gene: 15594842

Centisome position: 55.43

GC content: 23.53

Gene sequence:

>306_bases
ATGATTAAAAGGAAATTAAGATTACAACTAAAGAAAGCTAGGTTTAATGCTTCAAGGTCTAGATCTAAGAATAAATGTTT
TATTAAAAGAATGGAAAATAATAGAAAAATTATTTCTAAAAACAATATTAATGTGCAAGTTTTTCTTGTAAGAAGTCTTA
TTGGGAAATTAAATAAAAAGGTCAAAGTTTTAAAAGCATTAGGTTTAAATAAAATAGGCGATAAAAAGGTTCATTTTTTA
AATGAATCTATTAAGGGTATGCTTAACGAGACTATTAATATGATTTTATTAAGCGAGGTAATGTAA

Upstream 100 bases:

>100_bases
TGTAGTAAAGGCGACTTTTAAGGCATTTGATTTAGTTTTGAATGCTGAAAAAGTAGCAGAAATGCGAGGAAAAACTTTGA
AAACTTTATGGGGTTAATGT

Downstream 100 bases:

>100_bases
TGTTTAACTTGTTAAAGCCTAAGGGAGCGAGCAAGCGACGTAAAATTGTTGGCAGAGGTCCAGGTTCAGGACTTGGCAAA
ACTTCTGGGAGAGGTCAAAA

Product: 50S ribosomal protein L30

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIKRKLRLQLKKARFNASRSRSKNKCFIKRMENNRKIISKNNINVQVFLVRSLIGKLNKKVKVLKALGLNKIGDKKVHFL
NESIKGMLNETINMILLSEVM

Sequences:

>Translated_101_residues
MIKRKLRLQLKKARFNASRSRSKNKCFIKRMENNRKIISKNNINVQVFLVRSLIGKLNKKVKVLKALGLNKIGDKKVHFL
NESIKGMLNETINMILLSEVM
>Mature_101_residues
MIKRKLRLQLKKARFNASRSRSKNKCFIKRMENNRKIISKNNINVQVFLVRSLIGKLNKKVKVLKALGLNKIGDKKVHFL
NESIKGMLNETINMILLSEVM

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005996
- InterPro:   IPR016082 [H]

Pfam domain/function: PF00327 Ribosomal_L30 [H]

EC number: NA

Molecular weight: Translated: 11766; Mature: 11766

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRKLRLQLKKARFNASRSRSKNKCFIKRMENNRKIISKNNINVQVFLVRSLIGKLNKK
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHH
VKVLKALGLNKIGDKKVHFLNESIKGMLNETINMILLSEVM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKRKLRLQLKKARFNASRSRSKNKCFIKRMENNRKIISKNNINVQVFLVRSLIGKLNKK
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHH
VKVLKALGLNKIGDKKVHFLNESIKGMLNETINMILLSEVM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA