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The map label for this gene is nusG

Identifier: 15594739

GI number: 15594739

Start: 407344

End: 407898

Strand: Reverse

Name: nusG

Synonym: BB0394

Alternate gene names: 15594739

Gene position: 407898-407344 (Counterclockwise)

Preceding gene: 15594740

Following gene: 15594738

Centisome position: 44.79

GC content: 32.25

Gene sequence:

>555_bases
ATGTCTAGAGCTTGGTATGTAGTTCAAACTTATTCTCAATATGAGAAAAAGATAGAGCAGGACATAAGGCTTTTAATAAA
TGAAGGTGTTTTTGGCGGTGTGGTATTAGATGTTAAGGCTCCTATTGAAAAAGTAGAAGAGATAAGAAATGGCAAGAAAA
GAATAAGGGAGAGAAAAATTTGGCCAGGCTATATTCTTATTGAGCTAGATCTTCCAGAAGTAGGCTGGAAAGATATTATT
GCTAATATTATCAAAGTTCAAGGCGTTATTAATTTTGTTGGTGTTAGTAAGGGGCAAAGGCCTATTCCTATTAATGATGA
AGAAGTAAAAAGTGTTTTTATGCTTACTGGTGAGATTAAAGCAAATAAATCTATTTTTATGCTTTATGACTTTGAAGAAG
GAGAAAGAGTTAGAATTAAAGGCGGACCTTTTGACTCCTTTGAAGGACTTATTAGTTCTATTGATTATGAAAGAAAGAAA
TTAAAAGTTGCAGTTCAAATTTTTGGAAGATCAACGCCTGTTGAAGTTGATTTCCAACATATAGAAAAGATTTAA

Upstream 100 bases:

>100_bases
GGCTGGTATTATTTGTTTCAATTTTCTTGGGTATAGTCGATTATCTTATGTTTCTTGTTGTAACTTATGTATTTTAGTTT
TATTATAAGAAGGGTAAATT

Downstream 100 bases:

>100_bases
AATTTAATACTAATGGGAGCTTTGAAGGCGTTACTACCATAAGGAGATTATATGGCAAAAAAAAAAGCAATTTCTTGGAT
TAAATTGCAGGTTCCAGCTG

Product: transcription antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRNGKKRIRERKIWPGYILIELDLPEVGWKDII
ANIIKVQGVINFVGVSKGQRPIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGLISSIDYERKK
LKVAVQIFGRSTPVEVDFQHIEKI

Sequences:

>Translated_184_residues
MSRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRNGKKRIRERKIWPGYILIELDLPEVGWKDII
ANIIKVQGVINFVGVSKGQRPIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGLISSIDYERKK
LKVAVQIFGRSTPVEVDFQHIEKI
>Mature_183_residues
SRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRNGKKRIRERKIWPGYILIELDLPEVGWKDIIA
NIIKVQGVINFVGVSKGQRPIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGLISSIDYERKKL
KVAVQIFGRSTPVEVDFQHIEKI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain

Homologues:

Organism=Escherichia coli, GI1790414, Length=183, Percent_Identity=38.7978142076503, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUSG_BORBU (O51355)

Other databases:

- EMBL:   AE000783
- PIR:   A70149
- RefSeq:   NP_212528.1
- ProteinModelPortal:   O51355
- SMR:   O51355
- EnsemblBacteria:   EBBORT00000008937
- GeneID:   1195231
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0394
- NMPDR:   fig|224326.1.peg.778
- TIGR:   BB_0394
- GeneTree:   EBGT00050000006925
- HOGENOM:   HBG751162
- OMA:   VASGCEK
- ProtClustDB:   CLSK507557
- BioCyc:   BBUR224326:BB_0394-MONOMER
- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.30
- Gene3D:   G3DSA:3.30.70.940
- PRINTS:   PR00338
- SMART:   SM00739
- SMART:   SM00738
- TIGRFAMs:   TIGR00922

Pfam domain/function: PF02357 NusG; SSF82679 Transcrpt_antiterm_NusG_N; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 21216; Mature: 21085

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRNGKKRIRERKI
CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
WPGYILIELDLPEVGWKDIIANIIKVQGVINFVGVSKGQRPIPINDEEVKSVFMLTGEIK
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHEEEEEECEEE
ANKSIFMLYDFEEGERVRIKGGPFDSFEGLISSIDYERKKLKVAVQIFGRSTPVEVDFQH
CCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHCCHHHHHHEEEEEEECCCCCCEECHHH
IEKI
HCCC
>Mature Secondary Structure 
SRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRNGKKRIRERKI
CCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
WPGYILIELDLPEVGWKDIIANIIKVQGVINFVGVSKGQRPIPINDEEVKSVFMLTGEIK
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHEEEEEECEEE
ANKSIFMLYDFEEGERVRIKGGPFDSFEGLISSIDYERKKLKVAVQIFGRSTPVEVDFQH
CCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHCCHHHHHHEEEEEEECCCCCCEECHHH
IEKI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685