| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is bmpC
Identifier: 15594729
GI number: 15594729
Start: 394105
End: 395166
Strand: Reverse
Name: bmpC
Synonym: BB0384
Alternate gene names: 15594729
Gene position: 395166-394105 (Counterclockwise)
Preceding gene: 15594730
Following gene: 15594728
Centisome position: 43.39
GC content: 30.04
Gene sequence:
>1062_bases TTGTTTAAAAGATTTATTTTTATTACTTTATCTTTATTAGTATTTGCTTGTTTTAAATCTAATAAAAAGTCTATTAAATC TGACAAAGTTGTTGTAGGTGTTTTGGCTCATGGTAGCTTTTATGATAAAGGCTATAATCAAAGCGTTCATGATGGTGTTG TAAAACTTAGGGATAATTTTGGAATAAAGCTTATAACTAAATCTTTAAGACCTTATCCTATTGAGGGTAAAAGACTTCTT ACTGTTGATGAGGCAATGACTGAGGATGCTTATGAGGTTCAAAAAAATCCTTTAAATCTTTTTTGGTTGATTGGATACCG ATTTTCTGACTTGTCAGTTAAGCTTTCCTATGAACGTCCAGATATTTATTATGGTATTATAGATGCTTTTGATTATGGTG ATATTCAAGTTCCTAAGAATTCCTTGGCTATTAAGTTTAGAAATGAAGAGGCTGCATTTTTAGCTGGGTATATTGCTGCT AAGATGAGCAGAAAAGAAAAGATTGGATTTTTAACAGGTCCTATGAGTGAGCATGTAAAAGATTTTAAGTTTGGTTTTAA GGCTGGAATTTTTTATGCCAATCCTAAATTAAGATTAGTTTCAAAAAAAGCACCTTCTCTTTTTGATAAGGAGAAAGGCA AAGCAATGGCTCTATTCATGTATAAAGAAGATAAAGTAGGCGTTATTTTTCCAATAGCTGGTATAACTGGTCTTGGAGTT TATGACGCTGCTAAGGAGCTTGGACCTAAATATTATGTTATTGGTTTAAATCAAGATCAATCATATATTGCGCCTCAAAA TGTTATTACTTCAATAATTAAGGATATTGGTAAGGTTATTTATTCTATTTCATCAGAGTATATTAATAATAGAGTTTTTA AGGGTGGAATTATTATTGATCGGGGGTTAAAGGAAGGAGTAATAGAAATTGTTAAGGATCCCGATGTTTTAAACAATAGG TTGGTTGATGAAGTTATTGATCTAGAAAATAAAATAATAAGTGGAGAAATTATTGTTCCTGATAGTGAATATGCATTTGA TTTATTTAAATCAAAGTTATAA
Upstream 100 bases:
>100_bases TTTATAAATAAAGAATACTACTTGTTAGTAAAATAAAGTTAATATTTTAATTTTTAAAAAATTTAGAATTTTTAAAAAAA ATATAAGGAGAGGATTAATT
Downstream 100 bases:
>100_bases ACTACTTAAATATAGCTTTGTTTGTAAAGGGGAAATAGTTTATGAATAAAATATTGTTGTTGATTTTGCTTGAGAGTATT GTTTTTTTATCTTGTAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MFKRFIFITLSLLVFACFKSNKKSIKSDKVVVGVLAHGSFYDKGYNQSVHDGVVKLRDNFGIKLITKSLRPYPIEGKRLL TVDEAMTEDAYEVQKNPLNLFWLIGYRFSDLSVKLSYERPDIYYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAA KMSRKEKIGFLTGPMSEHVKDFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKAMALFMYKEDKVGVIFPIAGITGLGV YDAAKELGPKYYVIGLNQDQSYIAPQNVITSIIKDIGKVIYSISSEYINNRVFKGGIIIDRGLKEGVIEIVKDPDVLNNR LVDEVIDLENKIISGEIIVPDSEYAFDLFKSKL
Sequences:
>Translated_353_residues MFKRFIFITLSLLVFACFKSNKKSIKSDKVVVGVLAHGSFYDKGYNQSVHDGVVKLRDNFGIKLITKSLRPYPIEGKRLL TVDEAMTEDAYEVQKNPLNLFWLIGYRFSDLSVKLSYERPDIYYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAA KMSRKEKIGFLTGPMSEHVKDFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKAMALFMYKEDKVGVIFPIAGITGLGV YDAAKELGPKYYVIGLNQDQSYIAPQNVITSIIKDIGKVIYSISSEYINNRVFKGGIIIDRGLKEGVIEIVKDPDVLNNR LVDEVIDLENKIISGEIIVPDSEYAFDLFKSKL >Mature_353_residues MFKRFIFITLSLLVFACFKSNKKSIKSDKVVVGVLAHGSFYDKGYNQSVHDGVVKLRDNFGIKLITKSLRPYPIEGKRLL TVDEAMTEDAYEVQKNPLNLFWLIGYRFSDLSVKLSYERPDIYYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAA KMSRKEKIGFLTGPMSEHVKDFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKAMALFMYKEDKVGVIFPIAGITGLGV YDAAKELGPKYYVIGLNQDQSYIAPQNVITSIIKDIGKVIYSISSEYINNRVFKGGIIIDRGLKEGVIEIVKDPDVLNNR LVDEVIDLENKIISGEIIVPDSEYAFDLFKSKL
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BMPC_BORBU (O50169)
Other databases:
- EMBL: U49938 - EMBL: AF400111 - EMBL: AE000783 - EMBL: AF288609 - PIR: G70147 - RefSeq: NP_212518.1 - ProteinModelPortal: O50169 - EnsemblBacteria: EBBORT00000008593 - GeneID: 1195221 - GenomeReviews: AE000783_GR - KEGG: bbu:BB0384 - NMPDR: fig|224326.1.peg.768 - TIGR: BB_0384 - GeneTree: EBGT00050000006796 - HOGENOM: HBG617374 - OMA: STEHEFD - ProtClustDB: CLSK785735 - BioCyc: BBUR224326:BB_0384-MONOMER - InterPro: IPR003760
Pfam domain/function: PF02608 Bmp
EC number: NA
Molecular weight: Translated: 39825; Mature: 39825
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRFIFITLSLLVFACFKSNKKSIKSDKVVVGVLAHGSFYDKGYNQSVHDGVVKLRDNF CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHEEEECCC GIKLITKSLRPYPIEGKRLLTVDEAMTEDAYEVQKNPLNLFWLIGYRFSDLSVKLSYERP CEEEEECCCCCCCCCCCEEEEEHHHHCCCHHHHHCCCCEEEEEEEEEEECEEEEEEECCC DIYYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAAKMSRKEKIGFLTGPMSEHVK CEEEEEEECCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHH DFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKAMALFMYKEDKVGVIFPIAGITGLGV HHHCHHCCCEEEECCCEEEEECCCCCCHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCH YDAAKELGPKYYVIGLNQDQSYIAPQNVITSIIKDIGKVIYSISSEYINNRVFKGGIIID HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEE RGLKEGVIEIVKDPDVLNNRLVDEVIDLENKIISGEIIVPDSEYAFDLFKSKL CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECEEEECCCHHHHHHHHHCC >Mature Secondary Structure MFKRFIFITLSLLVFACFKSNKKSIKSDKVVVGVLAHGSFYDKGYNQSVHDGVVKLRDNF CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHEEEECCC GIKLITKSLRPYPIEGKRLLTVDEAMTEDAYEVQKNPLNLFWLIGYRFSDLSVKLSYERP CEEEEECCCCCCCCCCCEEEEEHHHHCCCHHHHHCCCCEEEEEEEEEEECEEEEEEECCC DIYYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAAKMSRKEKIGFLTGPMSEHVK CEEEEEEECCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHH DFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKAMALFMYKEDKVGVIFPIAGITGLGV HHHCHHCCCEEEECCCEEEEECCCCCCHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCH YDAAKELGPKYYVIGLNQDQSYIAPQNVITSIIKDIGKVIYSISSEYINNRVFKGGIIID HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEE RGLKEGVIEIVKDPDVLNNRLVDEVIDLENKIISGEIIVPDSEYAFDLFKSKL CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7988902; 8978084; 9403685; 11136458