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The map label for this gene is flgC

Identifier: 15594638

GI number: 15594638

Start: 302851

End: 303309

Strand: Reverse

Name: flgC

Synonym: BB0293

Alternate gene names: 15594638

Gene position: 303309-302851 (Counterclockwise)

Preceding gene: 15594639

Following gene: 15594637

Centisome position: 33.3

GC content: 35.51

Gene sequence:

>459_bases
ATGGGATTGTTTTCAAGCATTAATGTAGCTTCAACGGGATTAACAGCACAAAGGTTAAGGATTGATGTTATTTCTAATAA
CATTGCAAATGTTTCTACTTCTAGAACTCCTGATGGTGGACCTTATAGAAGGCAAAGGATTATTTTTGCACCAAGGGTTA
ATAATCCTTATTGGAAAGGGCCTTTTATTCCGGATTATCTTGATAATGGCATTGGTCAAGGAGTTAGGGTTGCTAGCATT
GAAAAAGATAAATCTCCATTAAAGTTAAAATATGATCCAGCTCACCCCGATTCAATAAGTTCTGGAGATAAAAAGGGTTA
TGTAGAGCTTCCCAATGTTAATTTAGTTGAAGAAATGGTAGATATGATTTCAGCTTCTCGTGCTTATGAGGCAAATTCTA
CTGTCATCAATAGTAGTAAGTCTATGTTTAGAAGTGCGTTAGCTATACTTCAAGGCTAA

Upstream 100 bases:

>100_bases
AAAACCAAATGATGTATCATCTTATGACTAATGTTCAGGCGCATTATTTTAAAAGTATAAATATTGTATTAAAATAAATT
AATATCTTAAGGAATGTAAA

Downstream 100 bases:

>100_bases
AGGAGAGATCATTGGTGAGAACAGATGCTTTTTTTACAGAAAATAATATTAATTTGGTTAAAAAAAATCCTTTGCATTTT
GATGTGAATCTTTTTAGTTC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKGPFIPDYLDNGIGQGVRVASI
EKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQG

Sequences:

>Translated_152_residues
MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKGPFIPDYLDNGIGQGVRVASI
EKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQG
>Mature_151_residues
GLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKGPFIPDYLDNGIGQGVRVASIE
KDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQG

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787314, Length=151, Percent_Identity=37.0860927152318, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGC_BORBU (Q57466)

Other databases:

- EMBL:   U43739
- EMBL:   L76303
- EMBL:   L40499
- EMBL:   AE000783
- PIR:   E70136
- RefSeq:   NP_212427.1
- EnsemblBacteria:   EBBORT00000008396
- GeneID:   1195130
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0293
- NMPDR:   fig|224326.1.peg.677
- TIGR:   BB_0293
- GeneTree:   EBGT00050000006982
- HOGENOM:   HBG700631
- OMA:   DKVVRDD
- PhylomeDB:   Q57466
- ProtClustDB:   PRK05681
- BioCyc:   BBUR224326:BB_0293-MONOMER
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299
- TIGRFAMs:   TIGR01395

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 16617; Mature: 16486

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG
CCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMV
CCCHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHH
DMISASRAYEANSTVINSSKSMFRSALAILQG
HHHHHHCCCCCCCEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG
CCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMV
CCCHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHH
DMISASRAYEANSTVINSSKSMFRSALAILQG
HHHHHHCCCCCCCEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685