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The map label for this gene is infC [H]

Identifier: 15594535

GI number: 15594535

Start: 189299

End: 189859

Strand: Reverse

Name: infC [H]

Synonym: BB0190

Alternate gene names: 15594535

Gene position: 189859-189299 (Counterclockwise)

Preceding gene: 15594539

Following gene: 15594534

Centisome position: 20.85

GC content: 31.73

Gene sequence:

>561_bases
ATGATAAATAGAAATGCCAATAGAGATAGGGATAGGTCCAGATCAAATGACAAGGAATTAAAAATTAATTACAGAATTAA
GGCTCGCGAGGTAAGAGTTATTTTTGAAAATGGAACACAAGAGGTTTTATCGATTGAAGATGCTATTAAAAAAGCAAAAG
AAGCTGGACTTGATTTGGTTGAGGTTTCTCCTAATGTATCTCCTCCGGTTTGCAAGATTATTGATTATGGAAAATATAAA
TTCCATCAAGAAAAGCGTCAAAAAGAGCAAAAGAAAAATCAAAAAGTAATTAAGCTTAAGGAAGTCAGAATGCAGCCCAA
GATAGATGCTCATGACCTTGATTTTAAATCAAAAAACATTTTAGGTTTTTTAAAAGATGGCAATAAGGTTAAAGTTACAA
TAAGATTTAGAGGTCGTGAACTTGCTCACACATATTTAGGATATGGTATCTTAAATAGCATTCTTGAAAAAGTAGGGGAT
GTGAATTATGTTTTGGAATCTGCGGCTAAAATGGAAGGCAAAACAATGTTTTTAATTGTAGCGCCTAAGTTTAAAAAATA
A

Upstream 100 bases:

>100_bases
TTTGTAAACATTATTCCTAGAATTTACTTTTTAGTGAATGTATAATAAAATTAATTATTAATGTTAATTATTAATTGATT
TAGGAGTATATATTTTTTAG

Downstream 100 bases:

>100_bases
ATATTAAATTAAAGGGGAAGAAATGGCAAATAAAATGAAAACACGCAAAAGTGCAAAAAAAAGGTATTCTTTTACTGTAA
ACGGTAAAGTTAAGTATAAA

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MINRNANRDRDRSRSNDKELKINYRIKAREVRVIFENGTQEVLSIEDAIKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYK
FHQEKRQKEQKKNQKVIKLKEVRMQPKIDAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGD
VNYVLESAAKMEGKTMFLIVAPKFKK

Sequences:

>Translated_186_residues
MINRNANRDRDRSRSNDKELKINYRIKAREVRVIFENGTQEVLSIEDAIKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYK
FHQEKRQKEQKKNQKVIKLKEVRMQPKIDAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGD
VNYVLESAAKMEGKTMFLIVAPKFKK
>Mature_186_residues
MINRNANRDRDRSRSNDKELKINYRIKAREVRVIFENGTQEVLSIEDAIKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYK
FHQEKRQKEQKKNQKVIKLKEVRMQPKIDAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGD
VNYVLESAAKMEGKTMFLIVAPKFKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=167, Percent_Identity=44.311377245509, Blast_Score=140, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 21534; Mature: 21534

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRNANRDRDRSRSNDKELKINYRIKAREVRVIFENGTQEVLSIEDAIKKAKEAGLDLV
CCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEE
EVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKIDAHDLDFKSKNI
EECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCE
LGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESAAKMEGKTMFLIV
EEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEE
APKFKK
CCCCCC
>Mature Secondary Structure
MINRNANRDRDRSRSNDKELKINYRIKAREVRVIFENGTQEVLSIEDAIKKAKEAGLDLV
CCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEE
EVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKIDAHDLDFKSKNI
EECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCE
LGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESAAKMEGKTMFLIV
EEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEE
APKFKK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA