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The map label for this gene is tpn50 [H]

Identifier: 15594512

GI number: 15594512

Start: 169539

End: 170708

Strand: Direct

Name: tpn50 [H]

Synonym: BB0167

Alternate gene names: 15594512

Gene position: 169539-170708 (Clockwise)

Preceding gene: 15594507

Following gene: 15594514

Centisome position: 18.62

GC content: 27.01

Gene sequence:

>1170_bases
ATGAATACCAAGGCGACTACACCATTGTTGTTATTATTTTTAATTCAAAGCTTAGCTTTTTCTTCTGAAATCTTTGAATT
TAAATACATTAAAGGTTCAAAGTTTAGATTAGAAGGCACAGATAATCAAAAAATATATTTCAATGGCCATTATAATTCAA
GCTCTAATACCAATATTCAAATTTCAAGTGAAATAAAAGACATAAAAGAAAACTTTGCAAGCATTAAAGCTTTTTTTAGA
ATCTTAAAAAGAGAAAATATTAATGAACCTTACCTATTAAATGAAGAGTTTGAAGAAATCTTCAGCGTAAATAAGCAAGG
AGAATATACAATAGGAGCAAATCAAAAAAGACCTTCTGTTAGAGGTATTCCAAGATTCCCAAAAACACCAATCAAAATAA
ATGAAAAATGGTCATATCTTGCAGAAGAATATATAGAAGCGTCAAAAATAGACAAAAGTATAAAAGATTTCGTTGTAAAA
TTTAATGTTAACTACGAATATAAAGGCAAAGAAGAGCACAATGGCAAGCATTACCACATAATTCTTTCGAATTATGAATC
ACAATACAATGTAAAAAACATCTCTTTCTATCAAAAAGTAGACCAAAAAATTTATTTTGATAATGAAATTGGCAATACAT
ATAAATACAGCGATAAATATATATTTGAAATAAATCAGAACAACAACCAACATTTTAAAATGATTGGAAACTCTCTTGGC
AGAATAGTTTCAATTGAGCTTCCAAATGATAATCTTATTGAAACTGAGGTTGAAAATTACATCCGAGAAAAAAAAATAAA
AGCTATTGAAGTTGAAAAAAACAATAAAGGTATTAATTTAAGCTTTGACATTGAATTTTATCCTAACTCATTTCAAATAC
TACAAAAAGAATATAAAAAAATTGACCTTATAGCTAAACTTCTTGAAAAATTTAAAAAAAATAACATACTAATAGAAGGA
CATACTGAGCAATTTGGATTGGAAGAAGAGATGCACGAGCTATCTGAAAAAAGAGCTCGTGCAATTGGAAATTATTTAAT
AAAAATGAAAGTAAAAGACAAAGACCAAATACTATTTAAAGGATGGGGATCTCAAAAACCAAAATATCCTAAGTCCTCCC
CATTAAAGGCTAAAAATAGGCGAGTAGAAATTACAATATTAAATAACTAA

Upstream 100 bases:

>100_bases
CTGTGTTATAAATTATAATAAATATCAGATCAGAACAACATATTAAATAGCAATTTTAAAAAAAATTAGAAATTAAATAC
TTTTATGATAAAATCTATTA

Downstream 100 bases:

>100_bases
CTTAAGATGTATCATCTTTTGTTCTTTTTTTCTTTTTTTGTCTGACAACTAATACACAAAAAAGCATAAGGAATAGCTAA
AAGTCTCTCCCTAGCAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Antigen tpp57 [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MNTKATTPLLLLFLIQSLAFSSEIFEFKYIKGSKFRLEGTDNQKIYFNGHYNSSSNTNIQISSEIKDIKENFASIKAFFR
ILKRENINEPYLLNEEFEEIFSVNKQGEYTIGANQKRPSVRGIPRFPKTPIKINEKWSYLAEEYIEASKIDKSIKDFVVK
FNVNYEYKGKEEHNGKHYHIILSNYESQYNVKNISFYQKVDQKIYFDNEIGNTYKYSDKYIFEINQNNNQHFKMIGNSLG
RIVSIELPNDNLIETEVENYIREKKIKAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEG
HTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN

Sequences:

>Translated_389_residues
MNTKATTPLLLLFLIQSLAFSSEIFEFKYIKGSKFRLEGTDNQKIYFNGHYNSSSNTNIQISSEIKDIKENFASIKAFFR
ILKRENINEPYLLNEEFEEIFSVNKQGEYTIGANQKRPSVRGIPRFPKTPIKINEKWSYLAEEYIEASKIDKSIKDFVVK
FNVNYEYKGKEEHNGKHYHIILSNYESQYNVKNISFYQKVDQKIYFDNEIGNTYKYSDKYIFEINQNNNQHFKMIGNSLG
RIVSIELPNDNLIETEVENYIREKKIKAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEG
HTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN
>Mature_389_residues
MNTKATTPLLLLFLIQSLAFSSEIFEFKYIKGSKFRLEGTDNQKIYFNGHYNSSSNTNIQISSEIKDIKENFASIKAFFR
ILKRENINEPYLLNEEFEEIFSVNKQGEYTIGANQKRPSVRGIPRFPKTPIKINEKWSYLAEEYIEASKIDKSIKDFVVK
FNVNYEYKGKEEHNGKHYHIILSNYESQYNVKNISFYQKVDQKIYFDNEIGNTYKYSDKYIFEINQNNNQHFKMIGNSLG
RIVSIELPNDNLIETEVENYIREKKIKAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEG
HTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN

Specific function: Could function as a porin [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 45890; Mature: 45890

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKATTPLLLLFLIQSLAFSSEIFEFKYIKGSKFRLEGTDNQKIYFNGHYNSSSNTNIQ
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCCCCEEE
ISSEIKDIKENFASIKAFFRILKRENINEPYLLNEEFEEIFSVNKQGEYTIGANQKRPSV
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHCCCCCCCEEECCCCCCCCC
RGIPRFPKTPIKINEKWSYLAEEYIEASKIDKSIKDFVVKFNVNYEYKGKEEHNGKHYHI
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEEEEEEECEEECCCCCCCCCEEEE
ILSNYESQYNVKNISFYQKVDQKIYFDNEIGNTYKYSDKYIFEINQNNNQHFKMIGNSLG
EEECCCCCCCCCCHHHHHHHCCEEEEECCCCCEEEECCEEEEEEECCCCCCHHHHHHCCC
RIVSIELPNDNLIETEVENYIREKKIKAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKK
CEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHH
IDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFK
HHHHHHHHHHHHHCCEEEEECCHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEE
GWGSQKPKYPKSSPLKAKNRRVEITILNN
CCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNTKATTPLLLLFLIQSLAFSSEIFEFKYIKGSKFRLEGTDNQKIYFNGHYNSSSNTNIQ
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCCCCEEE
ISSEIKDIKENFASIKAFFRILKRENINEPYLLNEEFEEIFSVNKQGEYTIGANQKRPSV
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHCCCCCCCEEECCCCCCCCC
RGIPRFPKTPIKINEKWSYLAEEYIEASKIDKSIKDFVVKFNVNYEYKGKEEHNGKHYHI
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEEEEEEECEEECCCCCCCCCEEEE
ILSNYESQYNVKNISFYQKVDQKIYFDNEIGNTYKYSDKYIFEINQNNNQHFKMIGNSLG
EEECCCCCCCCCCHHHHHHHCCEEEEECCCCCEEEECCEEEEEEECCCCCCHHHHHHCCC
RIVSIELPNDNLIETEVENYIREKKIKAIEVEKNNKGINLSFDIEFYPNSFQILQKEYKK
CEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHH
IDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFK
HHHHHHHHHHHHHCCEEEEECCHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEE
GWGSQKPKYPKSSPLKAKNRRVEITILNN
CCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8112835; 7623668; 9665876 [H]