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The map label for this gene is fliD

Identifier: 15594494

GI number: 15594494

Start: 148786

End: 150783

Strand: Reverse

Name: fliD

Synonym: BB0149

Alternate gene names: 15594494

Gene position: 150783-148786 (Counterclockwise)

Preceding gene: 15594495

Following gene: 15594492

Centisome position: 16.56

GC content: 29.83

Gene sequence:

>1998_bases
TTGGCATCAGGATTTTTTGTTCCTGGACTTGAGAGTAAGTACAATACTAAAGAAATTCGTGAATCCATGCTTAAGTCCGA
TAAGGCTAAAATTGATTCTTCTTTTAAGAAACTTGAATCTTTAGAGCAAGAGAAAAGTGCCTGGCAGTTAATTAATAGAA
AAATCTCTACTTTAAATTCTCTTGCAAAAGAACTTACATCACTCAACAGTCCTTTTAATCTAATGTCAGGAAATTCTAGT
AATAGCGAAGTTTTAACTTTGTCTACTAGATATGGATCTAAGAATGAGACTCATAAATTAATTGTTGATCAAATAGCGTC
AGCTGATGTGTTTTTGTCTTCAAATTTTGATCCTAAAAAAGTTACAATCCCAGAGGGAGATTATATATTTTTAGTTGGCA
AGAAAGAAATTAATGTAAAAAGTAATGGCAACATTGATTTACTTGTGAAGGATATTAATAACAAGGGAAAGGGCTTTTTA
TCTGCAAAAATAGTGAAAAGTGATAAAAATGGAAATAGTCGTTTTGTTTTGCAATCCTTAAAGGAGGGCAAAGAAAACAA
GCTTGTTATCAAAGGGGAGGGATTGTCTTTTGCTAAGCAAATTGGAATTTTAAGTGAGCTTAAAACCAATTTTAATCCTA
ATCTTTCAGATATTGTTGTAAATCAATCTAGCAGCAACAATAAACTTGCTTTTGAGAACAATGGTCTTGTTTTAAATCCG
CTTTCAGAAGTATCAATTGAAATTCCTGAAGATATTGAAATTACATCTAGGAGTAAGATTAAATTTGAAGTTAAGTATTT
TGATACAGGCTTGGAAGAGCCTGATAGTAAGATTATTTTTAATCCCGGAGGGGCTACATTTAAGGATGCAAAAGTTGAGA
GTGAAGATAGTGTAGTTGATCTTGGATCTGATTTAAAAACCCCTTTGGAAAAAAAATATATTCAAATGAATATGGTTAAA
ATATGTAGCAAGGAAGGTTCTTTGGAGCTTCCTTTAATAAATATTTCAAATAATTTTGAAGAAGTTGAAGTTGATGTTGG
AGCTCTTTCTAATTTGGAAGAAATAAATATTGAAAATAAAGCAAATAATAAAGTAATTGTGATTAGCAATGTTGAAATTT
TTGATCCAAAAAATAGAGATGGTCATTTGCCAATAAATGCTAAAAGTTTTGCTGAAAATGCAAAAATTAAATTTGATGGA
GTAGATGTTGAGAGAGATTCAAATGTTATAAATGATTTGGTTCCAAATGTGACATTAAGTTTAAAAAAACCCTCAAGTGA
TATGGTTGAGGCTAAAATTGAACCTGATTATGAGGGGATTAAGAGGGTTCTTTTAGATTTTATTGGTGCTTATAATGAGG
TTCTTGCTGAGATTAATATTGTAAGCTCTAATGAAGATCAGCCTAATAATCAAAAGTCTAATATAGTTGAAGAGCTAACT
TATCTTAGTGATTCTCAAAAAGAAGAGGCTTATAAAAATTTAGGTATTCTAAGGTCTGAATTTTTATTAAAAAATCTTAA
GTCCAAGCTAGAGTCAATAATTTTTAAGCCTTATGTTACTAGTGATCCTAATTTTTCAATAATTAATCAGATGGGAGTTT
TTACAAATTCCATTTCTTCTTCTGGTGGACTTTCTAGATATTTAAGACTTGATGAGAAAAAGTTTGATGAATCAATTCGT
AATAATATTGATAATGTTAGAGAGCTTTTTTTATATGATCTTAATGGTGACAGAGTGTATGATAATGGAATTGCTAAAAT
GCTAGGAGATTGTCTGTCGCCTCTTGTGGCTTCCGGAGGAGTTATTTATAATAAAATAAAGAATTACGACTTGAAAATTT
TTAATCAAAAAAATAAAGTTGAAGATTATAAAAAGAAGTACGAAGATAGAGAGAGAAAAGTGGAAGGTGAACTTAATACC
TTGGATTTTACCGTTAAGCGCATGAAAGATCAAGAAAATACATTAAAGGCTTTTGATTTTAATCAAAGAAATAAATAA

Upstream 100 bases:

>100_bases
AAGAATTCATGTTTTTAAAATTTATTTTATTTTTTTAATTATACATTATATTTTGTTTTCAATTTTATTAATGATATAAT
TTACCCCGGAGGGCAATATT

Downstream 100 bases:

>100_bases
TAATAATTATTTTTAATGCTATTGCTATTTGCGTTTCTTTTTTTTTAATTTTTGTGCTATTCTTTTTAACAGGCAAAAGG
ATTTGCCAAAGTCAGAAATT

Product: flagellar hook-associated protein FliD

Products: NA

Alternate protein names: HAP2; Filament cap protein

Number of amino acids: Translated: 665; Mature: 664

Protein sequence:

>665_residues
MASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQEKSAWQLINRKISTLNSLAKELTSLNSPFNLMSGNSS
NSEVLTLSTRYGSKNETHKLIVDQIASADVFLSSNFDPKKVTIPEGDYIFLVGKKEINVKSNGNIDLLVKDINNKGKGFL
SAKIVKSDKNGNSRFVLQSLKEGKENKLVIKGEGLSFAKQIGILSELKTNFNPNLSDIVVNQSSSNNKLAFENNGLVLNP
LSEVSIEIPEDIEITSRSKIKFEVKYFDTGLEEPDSKIIFNPGGATFKDAKVESEDSVVDLGSDLKTPLEKKYIQMNMVK
ICSKEGSLELPLINISNNFEEVEVDVGALSNLEEINIENKANNKVIVISNVEIFDPKNRDGHLPINAKSFAENAKIKFDG
VDVERDSNVINDLVPNVTLSLKKPSSDMVEAKIEPDYEGIKRVLLDFIGAYNEVLAEINIVSSNEDQPNNQKSNIVEELT
YLSDSQKEEAYKNLGILRSEFLLKNLKSKLESIIFKPYVTSDPNFSIINQMGVFTNSISSSGGLSRYLRLDEKKFDESIR
NNIDNVRELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGGVIYNKIKNYDLKIFNQKNKVEDYKKKYEDRERKVEGELNT
LDFTVKRMKDQENTLKAFDFNQRNK

Sequences:

>Translated_665_residues
MASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQEKSAWQLINRKISTLNSLAKELTSLNSPFNLMSGNSS
NSEVLTLSTRYGSKNETHKLIVDQIASADVFLSSNFDPKKVTIPEGDYIFLVGKKEINVKSNGNIDLLVKDINNKGKGFL
SAKIVKSDKNGNSRFVLQSLKEGKENKLVIKGEGLSFAKQIGILSELKTNFNPNLSDIVVNQSSSNNKLAFENNGLVLNP
LSEVSIEIPEDIEITSRSKIKFEVKYFDTGLEEPDSKIIFNPGGATFKDAKVESEDSVVDLGSDLKTPLEKKYIQMNMVK
ICSKEGSLELPLINISNNFEEVEVDVGALSNLEEINIENKANNKVIVISNVEIFDPKNRDGHLPINAKSFAENAKIKFDG
VDVERDSNVINDLVPNVTLSLKKPSSDMVEAKIEPDYEGIKRVLLDFIGAYNEVLAEINIVSSNEDQPNNQKSNIVEELT
YLSDSQKEEAYKNLGILRSEFLLKNLKSKLESIIFKPYVTSDPNFSIINQMGVFTNSISSSGGLSRYLRLDEKKFDESIR
NNIDNVRELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGGVIYNKIKNYDLKIFNQKNKVEDYKKKYEDRERKVEGELNT
LDFTVKRMKDQENTLKAFDFNQRNK
>Mature_664_residues
ASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQEKSAWQLINRKISTLNSLAKELTSLNSPFNLMSGNSSN
SEVLTLSTRYGSKNETHKLIVDQIASADVFLSSNFDPKKVTIPEGDYIFLVGKKEINVKSNGNIDLLVKDINNKGKGFLS
AKIVKSDKNGNSRFVLQSLKEGKENKLVIKGEGLSFAKQIGILSELKTNFNPNLSDIVVNQSSSNNKLAFENNGLVLNPL
SEVSIEIPEDIEITSRSKIKFEVKYFDTGLEEPDSKIIFNPGGATFKDAKVESEDSVVDLGSDLKTPLEKKYIQMNMVKI
CSKEGSLELPLINISNNFEEVEVDVGALSNLEEINIENKANNKVIVISNVEIFDPKNRDGHLPINAKSFAENAKIKFDGV
DVERDSNVINDLVPNVTLSLKKPSSDMVEAKIEPDYEGIKRVLLDFIGAYNEVLAEINIVSSNEDQPNNQKSNIVEELTY
LSDSQKEEAYKNLGILRSEFLLKNLKSKLESIIFKPYVTSDPNFSIINQMGVFTNSISSSGGLSRYLRLDEKKFDESIRN
NIDNVRELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGGVIYNKIKNYDLKIFNQKNKVEDYKKKYEDRERKVEGELNTL
DFTVKRMKDQENTLKAFDFNQRNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLID_BORBU (O51173)

Other databases:

- EMBL:   AE000783
- EMBL:   U66699
- PIR:   E70118
- RefSeq:   NP_212283.1
- EnsemblBacteria:   EBBORT00000008817
- GeneID:   1194984
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0149
- NMPDR:   fig|224326.1.peg.533
- TIGR:   BB_0149
- GeneTree:   EBGT00050000006725
- HOGENOM:   HBG352863
- OMA:   NFSIINQ
- ProtClustDB:   PRK06664
- BioCyc:   BBUR224326:BB_0149-MONOMER
- InterPro:   IPR010809
- InterPro:   IPR003481

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N

EC number: NA

Molecular weight: Translated: 74718; Mature: 74587

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQEKSAWQLINRKISTLNS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKELTSLNSPFNLMSGNSSNSEVLTLSTRYGSKNETHKLIVDQIASADVFLSSNFDPKK
HHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCE
VTIPEGDYIFLVGKKEINVKSNGNIDLLVKDINNKGKGFLSAKIVKSDKNGNSRFVLQSL
EECCCCCEEEEEECEEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHH
KEGKENKLVIKGEGLSFAKQIGILSELKTNFNPNLSDIVVNQSSSNNKLAFENNGLVLNP
HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCEEEEECCCEEECC
LSEVSIEIPEDIEITSRSKIKFEVKYFDTGLEEPDSKIIFNPGGATFKDAKVESEDSVVD
HHHCEEECCCCCEECCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEE
LGSDLKTPLEKKYIQMNMVKICSKEGSLELPLINISNNFEEVEVDVGALSNLEEINIENK
CCCHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEHHHHCCHHHCCCCCC
ANNKVIVISNVEIFDPKNRDGHLPINAKSFAENAKIKFDGVDVERDSNVINDLVPNVTLS
CCCEEEEEECEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCEEE
LKKPSSDMVEAKIEPDYEGIKRVLLDFIGAYNEVLAEINIVSSNEDQPNNQKSNIVEELT
EECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
YLSDSQKEEAYKNLGILRSEFLLKNLKSKLESIIFKPYVTSDPNFSIINQMGVFTNSISS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECCCCCHHHHHHHHHHHHCCCC
SGGLSRYLRLDEKKFDESIRNNIDNVRELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCC
VIYNKIKNYDLKIFNQKNKVEDYKKKYEDRERKVEGELNTLDFTVKRMKDQENTLKAFDF
EEEEHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECC
NQRNK
CCCCC
>Mature Secondary Structure 
ASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQEKSAWQLINRKISTLNS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKELTSLNSPFNLMSGNSSNSEVLTLSTRYGSKNETHKLIVDQIASADVFLSSNFDPKK
HHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCE
VTIPEGDYIFLVGKKEINVKSNGNIDLLVKDINNKGKGFLSAKIVKSDKNGNSRFVLQSL
EECCCCCEEEEEECEEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHH
KEGKENKLVIKGEGLSFAKQIGILSELKTNFNPNLSDIVVNQSSSNNKLAFENNGLVLNP
HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCEEEEECCCEEECC
LSEVSIEIPEDIEITSRSKIKFEVKYFDTGLEEPDSKIIFNPGGATFKDAKVESEDSVVD
HHHCEEECCCCCEECCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEE
LGSDLKTPLEKKYIQMNMVKICSKEGSLELPLINISNNFEEVEVDVGALSNLEEINIENK
CCCHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEHHHHCCHHHCCCCCC
ANNKVIVISNVEIFDPKNRDGHLPINAKSFAENAKIKFDGVDVERDSNVINDLVPNVTLS
CCCEEEEEECEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCEEE
LKKPSSDMVEAKIEPDYEGIKRVLLDFIGAYNEVLAEINIVSSNEDQPNNQKSNIVEELT
EECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
YLSDSQKEEAYKNLGILRSEFLLKNLKSKLESIIFKPYVTSDPNFSIINQMGVFTNSISS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECCCCCHHHHHHHHHHHHCCCC
SGGLSRYLRLDEKKFDESIRNNIDNVRELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCC
VIYNKIKNYDLKIFNQKNKVEDYKKKYEDRERKVEGELNTLDFTVKRMKDQENTLKAFDF
EEEEHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECC
NQRNK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685; 9168617