| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is 15594487
Identifier: 15594487
GI number: 15594487
Start: 142944
End: 144266
Strand: Reverse
Name: 15594487
Synonym: BB0142
Alternate gene names: NA
Gene position: 144266-142944 (Counterclockwise)
Preceding gene: 15594489
Following gene: 15594486
Centisome position: 15.84
GC content: 27.29
Gene sequence:
>1323_bases TTGAAAATATTAATTAAGTTTTATAACTTTAAAGTTTTGATTTTTATTATAAGGGGGCTTCAAATTAAAAAAATTTTTTT AATTTTTATTACTGTCTCTTTTTCTTTTGCTGAAATTATTCAAATATCCCCCAAGCAAGCTGTAAATATGGCTTTAGAAA ATAGCTTGGATTCAGAAAATGCTTTGTACAAAGAAAATATAAAAAAACTTTATAAAAATAATGCATGGAATGTTTTTGTT CCAAATGTTAACCTTAGCTCTACACTTAGTAGAAATCCTTCTGCTTTGAGTGAGCTTGAAAGAGATTATTGGGGTTTTGG GTTTGGAGTTGGGATTAATCTTTCTTTGTCCCCTTCTGTTTTAAAGAGAATGCAACTTGTTATGTTGGAATATGAAAGCG CAAAAATAGAAAGGGAGAGTGCTGTTCGTAATATCAAGCTAAATGTTCTTAAGTCTTACAATCAATTGATAGCTTTAAAG AGCACTTTGAAAGTTTTTGAGAGTCAAATACAAAATAGTAAACTTAAATTTGAACAAGCTAGAATTGCTTATAACAATGG ACTAATATCAGAAATAGATTTCCTTGATGCTCAGCTTAAGTATAAAAAATCTCAACCAGATTTGGATGGTCATATTATTA ATTTTGAAAAATCAAAAGAAATTTTCAAATTATTAATAGGATTAGATCATGATCAAGATTTTGAAATTATTGGAGAATTG CCAGACGAAACAATAGATTTTTCTCTATTTAATGAGGCATTAAATTTTAATGAATCATTAGAGATTAAGGATTTGAATAT GCGCTTAAAAATGACCGAGCAGCTCATTGATTCGCTTTGGTTAGATACTTATTTGCCAAGCCTTTCTTTGTCATTTTCTT ACTCTCCTTATAAATCATTTCATGAAAATTCCAAGGGCTTTTCAACTGGATTTTTAGCATCCTTTAGTTTAAATTATGGT TTAACTGAAATATTTCCATTTTCAAAGAGTTTTACAAAAATACAAGATAACAACTATCAGCTAAAAATACTACAAAACAA TGTTGAAGGTAAAATCAGGAATTTAAAATCTAGTATTGTGCAAAAAAGAAAAGATATTAGAAGATATAAAGCGATTCTTG ATGCTTCTAAAATTAATGTAGAATTAGCGAATAAAAATTATCAAATGGCATTTAATGCTTTTAATTCCGGGGTCATGGAT CTTTCTAAATTAAATGATATTGAACTTGTTTATAAGCAGAGCGATTTAAAGTTCATTGAAGATAAATTAAATTATGCCAA TTCTATACTTGAATATAAAAATTTAATAAATTCATTAGACTAA
Upstream 100 bases:
>100_bases AATTTTTATTAGAAAAATAAGAGCATAATTTAAGATAAATAAAATTTTAAAAATGTTCATACTTAGAATTGTATTATATT ATAATAATTAATCAAATGAA
Downstream 100 bases:
>100_bases GAGGTATTTTGATGAATTTGATTTTTAATATTAATTTATATTTAAAAAAATATTTTTTAGTTTTATTCTTAGTTTTAGTT GCTTGTGTTGGTGATAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein lC
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKILIKFYNFKVLIFIIRGLQIKKIFLIFITVSFSFAEIIQISPKQAVNMALENSLDSENALYKENIKKLYKNNAWNVFV PNVNLSSTLSRNPSALSELERDYWGFGFGVGINLSLSPSVLKRMQLVMLEYESAKIERESAVRNIKLNVLKSYNQLIALK STLKVFESQIQNSKLKFEQARIAYNNGLISEIDFLDAQLKYKKSQPDLDGHIINFEKSKEIFKLLIGLDHDQDFEIIGEL PDETIDFSLFNEALNFNESLEIKDLNMRLKMTEQLIDSLWLDTYLPSLSLSFSYSPYKSFHENSKGFSTGFLASFSLNYG LTEIFPFSKSFTKIQDNNYQLKILQNNVEGKIRNLKSSIVQKRKDIRRYKAILDASKINVELANKNYQMAFNAFNSGVMD LSKLNDIELVYKQSDLKFIEDKLNYANSILEYKNLINSLD
Sequences:
>Translated_440_residues MKILIKFYNFKVLIFIIRGLQIKKIFLIFITVSFSFAEIIQISPKQAVNMALENSLDSENALYKENIKKLYKNNAWNVFV PNVNLSSTLSRNPSALSELERDYWGFGFGVGINLSLSPSVLKRMQLVMLEYESAKIERESAVRNIKLNVLKSYNQLIALK STLKVFESQIQNSKLKFEQARIAYNNGLISEIDFLDAQLKYKKSQPDLDGHIINFEKSKEIFKLLIGLDHDQDFEIIGEL PDETIDFSLFNEALNFNESLEIKDLNMRLKMTEQLIDSLWLDTYLPSLSLSFSYSPYKSFHENSKGFSTGFLASFSLNYG LTEIFPFSKSFTKIQDNNYQLKILQNNVEGKIRNLKSSIVQKRKDIRRYKAILDASKINVELANKNYQMAFNAFNSGVMD LSKLNDIELVYKQSDLKFIEDKLNYANSILEYKNLINSLD >Mature_440_residues MKILIKFYNFKVLIFIIRGLQIKKIFLIFITVSFSFAEIIQISPKQAVNMALENSLDSENALYKENIKKLYKNNAWNVFV PNVNLSSTLSRNPSALSELERDYWGFGFGVGINLSLSPSVLKRMQLVMLEYESAKIERESAVRNIKLNVLKSYNQLIALK STLKVFESQIQNSKLKFEQARIAYNNGLISEIDFLDAQLKYKKSQPDLDGHIINFEKSKEIFKLLIGLDHDQDFEIIGEL PDETIDFSLFNEALNFNESLEIKDLNMRLKMTEQLIDSLWLDTYLPSLSLSFSYSPYKSFHENSKGFSTGFLASFSLNYG LTEIFPFSKSFTKIQDNNYQLKILQNNVEGKIRNLKSSIVQKRKDIRRYKAILDASKINVELANKNYQMAFNAFNSGVMD LSKLNDIELVYKQSDLKFIEDKLNYANSILEYKNLINSLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50847; Mature: 50847
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIKFYNFKVLIFIIRGLQIKKIFLIFITVSFSFAEIIQISPKQAVNMALENSLDSEN CEEEEEECCCEEEEHHHCCCCHHEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCCC ALYKENIKKLYKNNAWNVFVPNVNLSSTLSRNPSALSELERDYWGFGFGVGINLSLSPSV HHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHCCEEECEEEEEEECHHH LKRMQLVMLEYESAKIERESAVRNIKLNVLKSYNQLIALKSTLKVFESQIQNSKLKFEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RIAYNNGLISEIDFLDAQLKYKKSQPDLDGHIINFEKSKEIFKLLIGLDHDQDFEIIGEL HEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCHHEECC PDETIDFSLFNEALNFNESLEIKDLNMRLKMTEQLIDSLWLDTYLPSLSLSFSYSPYKSF CCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH HENSKGFSTGFLASFSLNYGLTEIFPFSKSFTKIQDNNYQLKILQNNVEGKIRNLKSSIV HCCCCCCCCCEEEEEECCCCCHHHCCCCCCHHEEECCCEEEEEEECCCCHHHHHHHHHHH QKRKDIRRYKAILDASKINVELANKNYQMAFNAFNSGVMDLSKLNDIELVYKQSDLKFIE HHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEHHCCCCCCHHHCCCEEEEEECCCHHHHH DKLNYANSILEYKNLINSLD HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKILIKFYNFKVLIFIIRGLQIKKIFLIFITVSFSFAEIIQISPKQAVNMALENSLDSEN CEEEEEECCCEEEEHHHCCCCHHEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCCC ALYKENIKKLYKNNAWNVFVPNVNLSSTLSRNPSALSELERDYWGFGFGVGINLSLSPSV HHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHCCEEECEEEEEEECHHH LKRMQLVMLEYESAKIERESAVRNIKLNVLKSYNQLIALKSTLKVFESQIQNSKLKFEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RIAYNNGLISEIDFLDAQLKYKKSQPDLDGHIINFEKSKEIFKLLIGLDHDQDFEIIGEL HEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCHHEECC PDETIDFSLFNEALNFNESLEIKDLNMRLKMTEQLIDSLWLDTYLPSLSLSFSYSPYKSF CCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH HENSKGFSTGFLASFSLNYGLTEIFPFSKSFTKIQDNNYQLKILQNNVEGKIRNLKSSIV HCCCCCCCCCEEEEEECCCCCHHHCCCCCCHHEEECCCEEEEEEECCCCHHHHHHHHHHH QKRKDIRRYKAILDASKINVELANKNYQMAFNAFNSGVMDLSKLNDIELVYKQSDLKFIE HHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEHHCCCCCCHHHCCCEEEEEECCCHHHHH DKLNYANSILEYKNLINSLD HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA