| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is pspE [C]
Identifier: 15594362
GI number: 15594362
Start: 15345
End: 15722
Strand: Reverse
Name: pspE [C]
Synonym: BB0016
Alternate gene names: 15594362
Gene position: 15722-15345 (Counterclockwise)
Preceding gene: 15594364
Following gene: 15594361
Centisome position: 1.73
GC content: 28.84
Gene sequence:
>378_bases ATGGCGATGAATTATGCAAGATTTGCAGTATTAATAGTTCTGCTTTTTTTTTATATTTGGTTTTTTATTATCCTTAGGAT GAAAAGAACTAATCTGTTTTTGTTAGAAAAAATCCAAAATGGAGCAAAAATTTTGGATATTCGGTCTCCCAAAGAATATA GCAAGTCTCATTATTTGAAGTCAATTAACATTCCTTTTAATAATTTATTTGCTAAAAAGGATAAATTAGGTGATTTTGAG TCCCCAATAATTGTTTATGGTAAAAGTTTTAATAAGTCTTACGAGGCTAAAAAAGTTTTAAAAAGCATGGGATTTAAGAA TGTGTTTGTTGCTGGAACCTTGAAAGACATGCCACAAGCAAAAAAAGAAGTTGGTTGA
Upstream 100 bases:
>100_bases AGCTACAAGCTAGTAATTTACTTGAATTCTATATTAATTTTGCAAAAAAAACAATTTTATTCACTTTTTTTATTTTTTTT GATATCATGTTCATGAAACT
Downstream 100 bases:
>100_bases TGGCTAAGATTATTGGGATATCTGGTGGTTCTGGAAGCGGAAAAACTACAGTTGTAAGCAAGATTAGTGAGTTTATTCCA GAATTTGTCCTTATTTCTCA
Product: glpE protein
Products: NA
Alternate protein names: GlpE Protein
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MAMNYARFAVLIVLLFFYIWFFIILRMKRTNLFLLEKIQNGAKILDIRSPKEYSKSHYLKSINIPFNNLFAKKDKLGDFE SPIIVYGKSFNKSYEAKKVLKSMGFKNVFVAGTLKDMPQAKKEVG
Sequences:
>Translated_125_residues MAMNYARFAVLIVLLFFYIWFFIILRMKRTNLFLLEKIQNGAKILDIRSPKEYSKSHYLKSINIPFNNLFAKKDKLGDFE SPIIVYGKSFNKSYEAKKVLKSMGFKNVFVAGTLKDMPQAKKEVG >Mature_124_residues AMNYARFAVLIVLLFFYIWFFIILRMKRTNLFLLEKIQNGAKILDIRSPKEYSKSHYLKSINIPFNNLFAKKDKLGDFES PIIVYGKSFNKSYEAKKVLKSMGFKNVFVAGTLKDMPQAKKEVG
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14558; Mature: 14426
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMNYARFAVLIVLLFFYIWFFIILRMKRTNLFLLEKIQNGAKILDIRSPKEYSKSHYLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHE SINIPFNNLFAKKDKLGDFESPIIVYGKSFNKSYEAKKVLKSMGFKNVFVAGTLKDMPQA ECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHH KKEVG HHHCC >Mature Secondary Structure AMNYARFAVLIVLLFFYIWFFIILRMKRTNLFLLEKIQNGAKILDIRSPKEYSKSHYLK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHE SINIPFNNLFAKKDKLGDFESPIIVYGKSFNKSYEAKKVLKSMGFKNVFVAGTLKDMPQA ECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHH KKEVG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA