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The map label for this gene is ydgG [C]

Identifier: 15594352

GI number: 15594352

Start: 6309

End: 7433

Strand: Reverse

Name: ydgG [C]

Synonym: BB0006

Alternate gene names: 15594352

Gene position: 7433-6309 (Counterclockwise)

Preceding gene: 15594353

Following gene: 15594351

Centisome position: 0.82

GC content: 28.09

Gene sequence:

>1125_bases
TTGATAAAAGCAGTAAAAAAACGAAAAGAGGGGAATATGCTTAAAGATTTAAATACAAATCAAGGGTTAAAGCCTTGGAG
AGTGGAATCTGTTTTTTATTGTATTGTTATAGTTTTAATATTTATTGGGGCCTTTAAAATAGCAGAAGCCGTATTTAAAC
CTTTGGCTATTTCCATAGTGTTGGGATTTTTAGTTTATCCTGTTTATACTTTTTTAGCAAGATTCAAAGTCCCAAAATTT
TTAATAGTTTTTATTATATTTTTTTTATTATTTTCTTTTTCTTATTTGATTTTTAGTTTTGTTTATTACAGCGTTACTGT
TTTAATGAAGCAATTGCCATACTATCAAAACCAATTAGCATTTATCATGAAAGATGTGCTTAGTCGATATAAAGTTGATA
GTTCTGTTATTAATGATGTGAATTTTTCTGGTTACATTTATCCTTTTTTAACAAGAGCTTATAATGAAATTATTGGATTT
ACAAGCAGTTTGGTAGTAGTTTTTTTGCTGTTGTATTTTTTGCTTTCAGAAATACATGTTTTTGAAATGAAGCTTGATAA
AGCTTTTAAAAAGCCGATATCTACTAGATTTATTGGGGCTTTAGATACCATTAATAATCAAATTGGCAAATATTTGGGAA
TAAAAATTCTTGTTAGTTGCTTAACGGGCATTTTAGTGTTTATTGGATTAACTTTGTTTGGGCAAGATTTTCCTCTTGTT
TGGGCAGTTCTTTCCTTTGTTTTCAATTTTATTCCCAGCATTGGATCCATATTAGCTGTGTTTTTTATTGTAATAACATC
TTTAATTCAATTTTATCCAAATTTAAACATAGTGCTTTATGTTTTTATATATAATACTTCTATTCAAATGTTGATTGGAA
ATATTCTTGAGCCAAAAATGCAGGGGAAAAGACTTGATATTTCACCATTTTTACTTTTATGTTTTTTGTTTTTTTGGGGA
TGGCTTTGGGGTATCGTAGGTCTTTTAATATCTTATCCTTTCACTGTGATTGTAAAGGTAATAGTTGATAATGTGAGTTG
GCTTAAGTCTTTTTCTGTATTTTTGGGTGGCTCTGAGATTTTAAGTAATATTAGCCATATTTCAAGTAAAGATAAGGAGA
TTTGA

Upstream 100 bases:

>100_bases
TTTTGCTGAGGCCAATTATACTAAGGGTACTAAATTGTATAATTGGATAATGGAGAAAATTTGCTTGAGCGTATGATTCA
TGTAACTTACTTTTGTTTAG

Downstream 100 bases:

>100_bases
TTTTGAAAAGAAAGGTTATGCTTACGGGAGATAGGCCTACTGGCGCTCTTCATTTGGGGCACTATGTGGGGTCTGTAGTA
AATCGGTTAAAATTTCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MIKAVKKRKEGNMLKDLNTNQGLKPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPKF
LIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRYKVDSSVINDVNFSGYIYPFLTRAYNEIIGF
TSSLVVVFLLLYFLLSEIHVFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPLV
WAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPKMQGKRLDISPFLLLCFLFFWG
WLWGIVGLLISYPFTVIVKVIVDNVSWLKSFSVFLGGSEILSNISHISSKDKEI

Sequences:

>Translated_374_residues
MIKAVKKRKEGNMLKDLNTNQGLKPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPKF
LIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRYKVDSSVINDVNFSGYIYPFLTRAYNEIIGF
TSSLVVVFLLLYFLLSEIHVFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPLV
WAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPKMQGKRLDISPFLLLCFLFFWG
WLWGIVGLLISYPFTVIVKVIVDNVSWLKSFSVFLGGSEILSNISHISSKDKEI
>Mature_374_residues
MIKAVKKRKEGNMLKDLNTNQGLKPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPKF
LIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRYKVDSSVINDVNFSGYIYPFLTRAYNEIIGF
TSSLVVVFLLLYFLLSEIHVFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPLV
WAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPKMQGKRLDISPFLLLCFLFFWG
WLWGIVGLLISYPFTVIVKVIVDNVSWLKSFSVFLGGSEILSNISHISSKDKEI

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family

Homologues:

Organism=Escherichia coli, GI1787885, Length=353, Percent_Identity=26.9121813031161, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87082271, Length=335, Percent_Identity=25.3731343283582, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788838, Length=330, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y006_BORBU (O51039)

Other databases:

- EMBL:   AE000783
- PIR:   F70100
- RefSeq:   NP_212140.1
- EnsemblBacteria:   EBBORT00000008964
- GeneID:   1194842
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0006
- NMPDR:   fig|224326.1.peg.390
- TIGR:   BB_0006
- GeneTree:   EBGT00050000006781
- HOGENOM:   HBG352935
- OMA:   IVCAETE
- PhylomeDB:   O51039
- ProtClustDB:   CLSK507287
- BioCyc:   BBUR224326:BB_0006-MONOMER
- InterPro:   IPR002549
- PANTHER:   PTHR21716

Pfam domain/function: PF01594 UPF0118

EC number: NA

Molecular weight: Translated: 42911; Mature: 42911

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-; HASH(0xb818cc4)-; HASH(0xb818aa8)-; HASH(0xb816b00)-; HASH(0xb818bf8)-; HASH(0xb818ba4)-; HASH(0xb818994)-; HASH(0xae5d940)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCH
>Mature Secondary Structure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HHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685