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The map label for this gene is ytmP [H]

Identifier: 154687131

GI number: 154687131

Start: 2827822

End: 2828631

Strand: Reverse

Name: ytmP [H]

Synonym: RBAM_027030

Alternate gene names: 154687131

Gene position: 2828631-2827822 (Counterclockwise)

Preceding gene: 154687132

Following gene: 154687129

Centisome position: 72.18

GC content: 50.25

Gene sequence:

>810_bases
TTGAACATTGATATGAACTGGTTGGGACAATTACTAGGTAGCGATTGGGAGATCTTCCCCGCCGGAGGAGCTACAGGAGA
TGCATATTATGCGAAACATAACGGCCAACAGCTTTTTTTAAAACGTAATAGCTCGCCCTTTTTAGCCGTGTTATCCGCCG
AAGGCATTGTTCCGAAGCTGGTTTGGACGAAACGGATGGAAAACGGGGACGTCATTACGGCTCAGCATTGGATGGCGGGC
AGGGAGCTGAAGGCAAAGGATATGAGCGGACGCCCGGTGGCTGAGCTGCTCCGCAAAATCCACACATCAAAAGCTTTGCT
CGACATGCTGAAAAGATTGGGAAAAGAACCGCTTGATCCGGGCGCCCTTTTGTCGCAGCTGAAGCAGGCCGTCTTTGCCG
TGCGGCAATTTTCGCCGCTTATTCAGGAAGGCCTTGCTTATTTGGAAGCTCATGTGGATCAGGTGCAATTCGGTGAAAAA
GTCGTTTGCCATTGTGATGTGAATCATAATAACTGGCTTCTGTCTGAAGACAACCAGCTGTATTTAATAGATTGGGACGG
CGCCATGATAGCTGATCCGGCCATGGATCTCGGCCCTTTATTGTATCATTACGTCGAAGAGCCAGCGTGGGACAGCTGGC
TTGGGATGTACGGCATGAAGCTCACGGAAGGGCTTCGGCTGAGGATGGCGTGGTACATGTTATCGGAGACCATCACCTTC
ATCGCCTGGCACAAATCAAAAGGAAACGACAAAGCGTATCATGATGCCATGGAAGAGCTTCATGCCCTGATGAAGCGGAT
TGTCAAGTAG

Upstream 100 bases:

>100_bases
TAGCTGTCTTTTTTATTCTCATGAAATTGTTTATGACAGGCCGCTCCGCCAATAGAGAAAGGCTGGAGGCCTATTCTAAA
ATATTTTAAGAAATGATGGG

Downstream 100 bases:

>100_bases
TCAGGAGTACGAATCCATCTGCTCCACCCATTGGGACAAATGGTTTTGGTGCTCCTGAATATGCGTGTCGATGGAATCGG
CCGTGATGCCGGACTGGCTG

Product: YtmP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNIDMNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVITAQHWMAG
RELKAKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLDPGALLSQLKQAVFAVRQFSPLIQEGLAYLEAHVDQVQFGEK
VVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHYVEEPAWDSWLGMYGMKLTEGLRLRMAWYMLSETITF
IAWHKSKGNDKAYHDAMEELHALMKRIVK

Sequences:

>Translated_269_residues
MNIDMNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVITAQHWMAG
RELKAKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLDPGALLSQLKQAVFAVRQFSPLIQEGLAYLEAHVDQVQFGEK
VVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHYVEEPAWDSWLGMYGMKLTEGLRLRMAWYMLSETITF
IAWHKSKGNDKAYHDAMEELHALMKRIVK
>Mature_269_residues
MNIDMNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVITAQHWMAG
RELKAKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLDPGALLSQLKQAVFAVRQFSPLIQEGLAYLEAHVDQVQFGEK
VVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHYVEEPAWDSWLGMYGMKLTEGLRLRMAWYMLSETITF
IAWHKSKGNDKAYHDAMEELHALMKRIVK

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30584; Mature: 30584

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDMNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAVLSAEGIVPKL
CCCCHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCHHH
VWTKRMENGDVITAQHWMAGRELKAKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLDP
HHHHHCCCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GALLSQLKQAVFAVRQFSPLIQEGLAYLEAHVDQVQFGEKVVCHCDVNHNNWLLSEDNQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEE
YLIDWDGAMIADPAMDLGPLLYHYVEEPAWDSWLGMYGMKLTEGLRLRMAWYMLSETITF
EEEECCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IAWHKSKGNDKAYHDAMEELHALMKRIVK
EEEECCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIDMNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAVLSAEGIVPKL
CCCCHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCHHH
VWTKRMENGDVITAQHWMAGRELKAKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLDP
HHHHHCCCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GALLSQLKQAVFAVRQFSPLIQEGLAYLEAHVDQVQFGEKVVCHCDVNHNNWLLSEDNQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEE
YLIDWDGAMIADPAMDLGPLLYHYVEEPAWDSWLGMYGMKLTEGLRLRMAWYMLSETITF
EEEECCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IAWHKSKGNDKAYHDAMEELHALMKRIVK
EEEECCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]