Click here to switch to the map view.

The map label for this gene is ytpQ

Identifier: 154687122

GI number: 154687122

Start: 2820593

End: 2821402

Strand: Reverse

Name: ytpQ

Synonym: RBAM_026940

Alternate gene names: NA

Gene position: 2821402-2820593 (Counterclockwise)

Preceding gene: 154687123

Following gene: 154687121

Centisome position: 72.0

GC content: 48.02

Gene sequence:

>810_bases
TTGAAAATGACGTCAAGGAAGCTGGCGGATTTATTAAAACAGCGCCTGCAGCACGAGAACCGATCCTTCTTTTTTGACAG
AGAAAAAGACACCCTCCGTGTTGAGGATCAAACGACCAAAAAAGGCATCACATTGGAGCTCCCGCCGATCATTGCGAAGT
GGGAGACGAAAAAAGAAGAAGCGATCGACGAAATCGTCTACTATGTGTCAGAAGCAATGGAGGCGATGGAAGGCAGCGGA
CAGGAGATGTCCGGAAAGGAAGCCGGAATCTATCCGGTCATCCGTTCCACATCATTTCCCGATCAAACGAGCGACGGCAT
TCCGCTCGTGTATGATGACCATACGGCCGAAACAAGAATCTACTACGCGCTTGACCTCGGCAAGACGTACCGCTTAATTG
ACAGCCGGATGCTCGAGAAAGAAAACTGGACAAAAGAACGCATCAGGGAGACGGCGTCATTCAATCTCCGCTCTCTTCCT
TCAGTTGTGAAACAGGATACGGTTGCGGACAATTATTTTTATTTTTTCAGGGCGAATGACGGCTATGACGCCAGCCGGAT
TCTCAATGATTCGATTCTTCATGAATACAAGCAGGCCGCTGAAGGCGAATTGGCGATTTCCGTCCCGCATCAGGATGTAT
TAATACTTGCTGACATTCGAAATGAATCGGGTTATGATATTTTAGGGCAAATGTCCATGAGCTTCTTTGCAAGCGGCACG
GTGCCGATTACGGCCCTTTCATTTCTGTATAATGAAGGCAGACTGGAACCTGTGTTTATCATGGCGAAAAGCCGGCCGAA
AAAGGATTAG

Upstream 100 bases:

>100_bases
AGAAGTGAACCGCTTCGTCAGCAAAGACCGTAAAACAAAAGAAGAAATTGAGCAATTTTTAACCGATTCCCTTGCTAAAG
CATAAAGGAGGCCACGGGCT

Downstream 100 bases:

>100_bases
AAAGGATTTTTCTTATGAACGCTTTTTACAATAAAGAAGGTGTGGGAGATACGCTTCTGATCTCTCTTAAAGATGCGGCA
CGCGAAGAAATCGGCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKMTSRKLADLLKQRLQHENRSFFFDREKDTLRVEDQTTKKGITLELPPIIAKWETKKEEAIDEIVYYVSEAMEAMEGSG
QEMSGKEAGIYPVIRSTSFPDQTSDGIPLVYDDHTAETRIYYALDLGKTYRLIDSRMLEKENWTKERIRETASFNLRSLP
SVVKQDTVADNYFYFFRANDGYDASRILNDSILHEYKQAAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFASGT
VPITALSFLYNEGRLEPVFIMAKSRPKKD

Sequences:

>Translated_269_residues
MKMTSRKLADLLKQRLQHENRSFFFDREKDTLRVEDQTTKKGITLELPPIIAKWETKKEEAIDEIVYYVSEAMEAMEGSG
QEMSGKEAGIYPVIRSTSFPDQTSDGIPLVYDDHTAETRIYYALDLGKTYRLIDSRMLEKENWTKERIRETASFNLRSLP
SVVKQDTVADNYFYFFRANDGYDASRILNDSILHEYKQAAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFASGT
VPITALSFLYNEGRLEPVFIMAKSRPKKD
>Mature_269_residues
MKMTSRKLADLLKQRLQHENRSFFFDREKDTLRVEDQTTKKGITLELPPIIAKWETKKEEAIDEIVYYVSEAMEAMEGSG
QEMSGKEAGIYPVIRSTSFPDQTSDGIPLVYDDHTAETRIYYALDLGKTYRLIDSRMLEKENWTKERIRETASFNLRSLP
SVVKQDTVADNYFYFFRANDGYDASRILNDSILHEYKQAAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFASGT
VPITALSFLYNEGRLEPVFIMAKSRPKKD

Specific function: Unknown

COG id: COG4848

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0354 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2694_BACA2 (A7Z7S6)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001422283.1
- STRING:   A7Z7S6
- EnsemblBacteria:   EBBACT00000005108
- GeneID:   5459605
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_026940
- eggNOG:   COG4848
- GeneTree:   EBGT00050000002339
- HOGENOM:   HBG314016
- OMA:   IYPVIRS
- ProtClustDB:   PRK13668
- BioCyc:   BAMY326423:RBAM_026940-MONOMER
- HAMAP:   MF_01548
- InterPro:   IPR010838
- PIRSF:   PIRSF012562

Pfam domain/function: PF07285 DUF1444

EC number: NA

Molecular weight: Translated: 30888; Mature: 30888

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTSRKLADLLKQRLQHENRSFFFDREKDTLRVEDQTTKKGITLELPPIIAKWETKKEE
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCCEEEECCCCEECCCCHHHH
AIDEIVYYVSEAMEAMEGSGQEMSGKEAGIYPVIRSTSFPDQTSDGIPLVYDDHTAETRI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEE
YYALDLGKTYRLIDSRMLEKENWTKERIRETASFNLRSLPSVVKQDTVADNYFYFFRAND
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCC
GYDASRILNDSILHEYKQAAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFASGT
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCC
VPITALSFLYNEGRLEPVFIMAKSRPKKD
CHHHHHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKMTSRKLADLLKQRLQHENRSFFFDREKDTLRVEDQTTKKGITLELPPIIAKWETKKEE
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCCEEEECCCCEECCCCHHHH
AIDEIVYYVSEAMEAMEGSGQEMSGKEAGIYPVIRSTSFPDQTSDGIPLVYDDHTAETRI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEE
YYALDLGKTYRLIDSRMLEKENWTKERIRETASFNLRSLPSVVKQDTVADNYFYFFRAND
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCC
GYDASRILNDSILHEYKQAAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFASGT
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCC
VPITALSFLYNEGRLEPVFIMAKSRPKKD
CHHHHHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA