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The map label for this gene is sspA

Identifier: 154687078

GI number: 154687078

Start: 2778143

End: 2778364

Strand: Reverse

Name: sspA

Synonym: RBAM_026500

Alternate gene names: NA

Gene position: 2778364-2778143 (Counterclockwise)

Preceding gene: 154687079

Following gene: 154687077

Centisome position: 70.9

GC content: 47.75

Gene sequence:

>222_bases
ATGTCACAACAATCAAACAGCGGAAACAGCAACCAGCTTTTAGTGCCAGGCGCTGCTCAAGCTATCGACCAAATGAAGTA
TGAAATCGCTTCTGAATTCGGTGTAAACCTTGGACCGGAAACAACTTCTCGCGCCAACGGTTCTGTCGGTGGAGAAATCA
CAAAACGTCTTGTCTCTTTTGCTCAGCAAAGCATGGGCGGAAGCAGCCAGCAGCAGTTTTAA

Upstream 100 bases:

>100_bases
AGTTTGCCGGCCTGTTTTAAAACTGTATACAATTACCAAAGTTTTTTTGAATGAAGACATGTGTTTTATCACATTCTATA
CTCACAAGGAGGTGATACAC

Downstream 100 bases:

>100_bases
TCACAACTTCACATAATGGCTAAGAGAGCGGGGAATTCCCCGCTCTTTTTTCATGAGTATAGATAGAAGGCGGGAAGCAA
TTTATGCATATTTTTATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: SASP-1 [H]

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSQQSNSGNSNQLLVPGAAQAIDQMKYEIASEFGVNLGPETTSRANGSVGGEITKRLVSFAQQSMGGSSQQQF

Sequences:

>Translated_73_residues
MSQQSNSGNSNQLLVPGAAQAIDQMKYEIASEFGVNLGPETTSRANGSVGGEITKRLVSFAQQSMGGSSQQQF
>Mature_72_residues
SQQSNSGNSNQLLVPGAAQAIDQMKYEIASEFGVNLGPETTSRANGSVGGEITKRLVSFAQQSMGGSSQQQF

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7652; Mature: 7521

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQSNSGNSNQLLVPGAAQAIDQMKYEIASEFGVNLGPETTSRANGSVGGEITKRLVSF
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AQQSMGGSSQQQF
HHHHCCCCCCCCC
>Mature Secondary Structure 
SQQSNSGNSNQLLVPGAAQAIDQMKYEIASEFGVNLGPETTSRANGSVGGEITKRLVSF
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AQQSMGGSSQQQF
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA