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The map label for this gene is ytkL

Identifier: 154687062

GI number: 154687062

Start: 2762684

End: 2763370

Strand: Reverse

Name: ytkL

Synonym: RBAM_026340

Alternate gene names: NA

Gene position: 2763370-2762684 (Counterclockwise)

Preceding gene: 154687063

Following gene: 154687061

Centisome position: 70.52

GC content: 50.36

Gene sequence:

>687_bases
ATGAAAGTGACTTATCACGGACATTCTGTCATTCAAGTGGAAACGAAAACCCATAACATTATTTTTGATCCGTTTCTGAC
CGGAAACAGTCTGACAAATTTGAAACCGGAAGAAGTGAAAGCGGATGTCATCCTGCTTACTCACGGACACAATGACCATG
TCGGAGATACAGAGCAGATCGCTAAACAAAACGATGCGCTCGTTATTGCGCCGAACGAGCTGGCCGTTTATCTCGGCTTT
AAAGGTTTAAAGGTCCACCCGATGCATATCGGAGGGGCGCGCCAATTTGATTTCGGTAAAGTGAAACTGACACAGGCATT
CCACGGATCGGCGGTCACTGATGAAGAAAACAAAACCATTACGTACACGGGGATGCCGGCTGGGATTTTATTGACGATTG
ACGGCAAAACGATTTTCCACGCCGGGGACACGGCGCTGTTCTCTGATATGAAACTGATCGGGGAACTGAATCACATTGAC
CTGGCGTTTCTGCCGATCGGTGATAACTTCACCATGGGCCCTGAAGATGCGAAACTCGCGGCTGAGTGGCTGAGAGCGAA
ACAGGTCGTTCCCGTCCATTACAATACATTCCCCGTCATTGAACAGGACCCTGACGCTTTCGCCGAAAGTCTGCCCGGAG
GCGTCGGCAAAGTCATGGCGGCCGGCGAGACCATTGAGCTTGCCTGA

Upstream 100 bases:

>100_bases
AGGCGGGCTGAATGTGATTAACAGGCATCAATCCCTGTAAGTTTTTTCGTTTGTCAAAAAGGGAACTTGATAAATATTAA
TTTTTTATGAGGTGAAAACG

Downstream 100 bases:

>100_bases
CATATGTGTCAAAGACCTTCTGAATCAAGCATTCAGAAGGTCTTTTTGTGATGCCGCCTTTTTTCGGGCGTCTCATTGCG
AATGAATCCCCCGTACCCTT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKVTYHGHSVIQVETKTHNIIFDPFLTGNSLTNLKPEEVKADVILLTHGHNDHVGDTEQIAKQNDALVIAPNELAVYLGF
KGLKVHPMHIGGARQFDFGKVKLTQAFHGSAVTDEENKTITYTGMPAGILLTIDGKTIFHAGDTALFSDMKLIGELNHID
LAFLPIGDNFTMGPEDAKLAAEWLRAKQVVPVHYNTFPVIEQDPDAFAESLPGGVGKVMAAGETIELA

Sequences:

>Translated_228_residues
MKVTYHGHSVIQVETKTHNIIFDPFLTGNSLTNLKPEEVKADVILLTHGHNDHVGDTEQIAKQNDALVIAPNELAVYLGF
KGLKVHPMHIGGARQFDFGKVKLTQAFHGSAVTDEENKTITYTGMPAGILLTIDGKTIFHAGDTALFSDMKLIGELNHID
LAFLPIGDNFTMGPEDAKLAAEWLRAKQVVPVHYNTFPVIEQDPDAFAESLPGGVGKVMAAGETIELA
>Mature_228_residues
MKVTYHGHSVIQVETKTHNIIFDPFLTGNSLTNLKPEEVKADVILLTHGHNDHVGDTEQIAKQNDALVIAPNELAVYLGF
KGLKVHPMHIGGARQFDFGKVKLTQAFHGSAVTDEENKTITYTGMPAGILLTIDGKTIFHAGDTALFSDMKLIGELNHID
LAFLPIGDNFTMGPEDAKLAAEWLRAKQVVPVHYNTFPVIEQDPDAFAESLPGGVGKVMAAGETIELA

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2634_BACA2 (A7Z7L6)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001422223.1
- ProteinModelPortal:   A7Z7L6
- STRING:   A7Z7L6
- EnsemblBacteria:   EBBACT00000004745
- GeneID:   5462704
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_026340
- eggNOG:   COG2220
- GeneTree:   EBGT00050000001185
- HOGENOM:   HBG741314
- OMA:   VILLTHG
- ProtClustDB:   PRK00685
- BioCyc:   BAMY326423:RBAM_026340-MONOMER
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 24750; Mature: 24750

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTYHGHSVIQVETKTHNIIFDPFLTGNSLTNLKPEEVKADVILLTHGHNDHVGDTEQI
CEEEECCCEEEEEEECCCEEEEECEECCCCCCCCCHHHEEEEEEEEEECCCCCCCCHHHH
AKQNDALVIAPNELAVYLGFKGLKVHPMHIGGARQFDFGKVKLTQAFHGSAVTDEENKTI
HHCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEE
TYTGMPAGILLTIDGKTIFHAGDTALFSDMKLIGELNHIDLAFLPIGDNFTMGPEDAKLA
EEECCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHH
AEWLRAKQVVPVHYNTFPVIEQDPDAFAESLPGGVGKVMAAGETIELA
HHHHHHCCEEEEEECCCCCEECCHHHHHHHCCCCCCEEEECCEEEEEC
>Mature Secondary Structure
MKVTYHGHSVIQVETKTHNIIFDPFLTGNSLTNLKPEEVKADVILLTHGHNDHVGDTEQI
CEEEECCCEEEEEEECCCEEEEECEECCCCCCCCCHHHEEEEEEEEEECCCCCCCCHHHH
AKQNDALVIAPNELAVYLGFKGLKVHPMHIGGARQFDFGKVKLTQAFHGSAVTDEENKTI
HHCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEE
TYTGMPAGILLTIDGKTIFHAGDTALFSDMKLIGELNHIDLAFLPIGDNFTMGPEDAKLA
EEECCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHH
AEWLRAKQVVPVHYNTFPVIEQDPDAFAESLPGGVGKVMAAGETIELA
HHHHHHCCEEEEEECCCCCEECCHHHHHHHCCCCCCEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA