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The map label for this gene is yjdF [H]

Identifier: 154687047

GI number: 154687047

Start: 2745688

End: 2746098

Strand: Reverse

Name: yjdF [H]

Synonym: RBAM_026190

Alternate gene names: 154687047

Gene position: 2746098-2745688 (Counterclockwise)

Preceding gene: 154687048

Following gene: 154687046

Centisome position: 70.08

GC content: 33.09

Gene sequence:

>411_bases
ATGAAATTAACGGTTTACTACGATGGTCAGTTTTGGGTAGGAGTCATTGAAGTTGTGAATGACGGGAAATTAAGAGCAAT
TCGTCATTTGTTTGGACAAGAGCCAAAGGATTCAGAAATAATGCATTTTGTTAATAATCAACTTTTACAGACTCTCTCCC
GCACTGAACAAGAAGGGGTTTGTGTTAAAGTAAAATCTAAGAAATTAAACCCAAAAAGATTGCAGCGGCAAGCTTCTAAA
GAAATGAAAAATATCGGGATATCAACTAAGGCACAAAAAGCGATAAAACAGGAGCTTGAAGCAAGAAAAGAAAAGAAAAA
ACAACTGAATAGAAAACAAAGAGAAAAAATAAAGGAACAAAAATATTTAATCAGAAAACAAAAAGCAAAAGAAAAGCATA
GGGGAAAATAG

Upstream 100 bases:

>100_bases
ATTCGGTTGGTAGTCCGGATGCATGATTTAAAATGTCAGTAACCTTCCCCTCCTCGGGATGTCCATCATTCTTCAGTAAA
TTTAGGAGGAGGGAATCGTT

Downstream 100 bases:

>100_bases
TTGGAGAGCCCGATGAAGCCCTTCGATTGAAAAGTTGAGCGGCATCAGTTAGTTTCTTCGGACTGATTTAGAAAAAAAAA
GTATAAGTCAGAGCCCTTCT

Product: YjdF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKLTVYYDGQFWVGVIEVVNDGKLRAIRHLFGQEPKDSEIMHFVNNQLLQTLSRTEQEGVCVKVKSKKLNPKRLQRQASK
EMKNIGISTKAQKAIKQELEARKEKKKQLNRKQREKIKEQKYLIRKQKAKEKHRGK

Sequences:

>Translated_136_residues
MKLTVYYDGQFWVGVIEVVNDGKLRAIRHLFGQEPKDSEIMHFVNNQLLQTLSRTEQEGVCVKVKSKKLNPKRLQRQASK
EMKNIGISTKAQKAIKQELEARKEKKKQLNRKQREKIKEQKYLIRKQKAKEKHRGK
>Mature_136_residues
MKLTVYYDGQFWVGVIEVVNDGKLRAIRHLFGQEPKDSEIMHFVNNQLLQTLSRTEQEGVCVKVKSKKLNPKRLQRQASK
EMKNIGISTKAQKAIKQELEARKEKKKQLNRKQREKIKEQKYLIRKQKAKEKHRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016787 [H]

Pfam domain/function: PF11208 DUF2992 [H]

EC number: NA

Molecular weight: Translated: 16085; Mature: 16085

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTVYYDGQFWVGVIEVVNDGKLRAIRHLFGQEPKDSEIMHFVNNQLLQTLSRTEQEGV
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
CVKVKSKKLNPKRLQRQASKEMKNIGISTKAQKAIKQELEARKEKKKQLNRKQREKIKEQ
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYLIRKQKAKEKHRGK
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLTVYYDGQFWVGVIEVVNDGKLRAIRHLFGQEPKDSEIMHFVNNQLLQTLSRTEQEGV
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
CVKVKSKKLNPKRLQRQASKEMKNIGISTKAQKAIKQELEARKEKKKQLNRKQREKIKEQ
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYLIRKQKAKEKHRGK
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]